Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_O11
         (1257 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    31   1.4  
07_03_1136 + 24218601-24218734,24218769-24219906                       24   1.8  

>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 25/91 (27%), Positives = 27/91 (29%)
 Frame = +1

Query: 328  PPPXXXGGKKXFXPXPXXXXXXXXXXNYIKXTTNFLGXXFXXXPPPPPXGGGGXXXFXXG 507
            PPP   GG     P P                   +G      PPPPP GG G       
Sbjct: 1110 PPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGV----PPPPPVGGLGGPPAPP- 1164

Query: 508  XXXXXXKKKXXXXXXGGGXXPXPPPPXGXXG 600
                  +         GG  P PPPP G  G
Sbjct: 1165 -PPAGFRGGTPPPNAHGGVAPPPPPPRGHGG 1194


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 23.8 bits (49), Expect(3) = 1.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 485 PPPPXGGGGG 456
           PP P GGGGG
Sbjct: 132 PPAPGGGGGG 141



 Score = 22.2 bits (45), Expect(3) = 1.8
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -2

Query: 479 PPXGGGGGXXKNXXP 435
           PP GGGGG      P
Sbjct: 172 PPGGGGGGGGPGRAP 186



 Score = 21.8 bits (44), Expect(3) = 1.8
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -2

Query: 599 PXXPXGGGGXGXXPPP 552
           P  P G GG G   PP
Sbjct: 118 PSLPPGAGGGGGARPP 133


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,031,776
Number of Sequences: 37544
Number of extensions: 384908
Number of successful extensions: 1846
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3887643768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)