Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_O11
         (1257 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78013-8|CAN99686.1|  373|Caenorhabditis elegans Hypothetical pr...    26   0.77 
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    25   2.2  

>Z78013-8|CAN99686.1|  373|Caenorhabditis elegans Hypothetical
           protein F15B9.10 protein.
          Length = 373

 Score = 26.2 bits (55), Expect(2) = 0.77
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -3

Query: 484 PPPQXGGGGG 455
           PPPQ GGGGG
Sbjct: 274 PPPQQGGGGG 283



 Score = 24.6 bits (51), Expect(2) = 0.77
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -3

Query: 598 PXXPXGGGGXXHXPPP 551
           P  P GGGG    PPP
Sbjct: 261 PTNPMGGGGGYPQPPP 276


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 25.4 bits (53), Expect(2) = 2.2
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +1

Query: 475 GGGGXXXFXXGXXXXXXKKKXXXXXXGGGXXPXPPPP 585
           GGGG      G               GGG  P PPPP
Sbjct: 80  GGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116



 Score = 23.8 bits (49), Expect(2) = 2.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 457 PPPPPXGGGG 486
           PPPPP  GGG
Sbjct: 55  PPPPPACGGG 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,968,087
Number of Sequences: 27780
Number of extensions: 194267
Number of successful extensions: 872
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3495543430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)