Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_O05
         (886 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0JQC8 Cluster: Os01g0169900 protein; n=7; commelinids|...    38   0.45 
UniRef50_Q9VBZ2 Cluster: CG11786-PA; n=1; Drosophila melanogaste...    38   0.45 
UniRef50_Q1DWE3 Cluster: Putative uncharacterized protein; n=1; ...    35   3.2  
UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain; ...    34   4.2  
UniRef50_A5AY32 Cluster: Putative uncharacterized protein; n=1; ...    34   4.2  
UniRef50_UPI0000E49F56 Cluster: PREDICTED: similar to annexin A6...    33   7.3  
UniRef50_A7EUK1 Cluster: Putative uncharacterized protein; n=1; ...    33   7.3  
UniRef50_UPI0000E499B2 Cluster: PREDICTED: similar to conserved ...    33   9.7  
UniRef50_Q1ZXG9 Cluster: Argonaut-like protein; n=1; Dictyosteli...    33   9.7  
UniRef50_A0BRA8 Cluster: Chromosome undetermined scaffold_122, w...    33   9.7  

>UniRef50_Q0JQC8 Cluster: Os01g0169900 protein; n=7;
           commelinids|Rep: Os01g0169900 protein - Oryza sativa
           subsp. japonica (Rice)
          Length = 628

 Score = 37.5 bits (83), Expect = 0.45
 Identities = 28/72 (38%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
 Frame = +1

Query: 205 TPNPFFA--QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDPPQGRP 369
           TP P  A  QP     Y P  + P  V PP  Y P  +G  P     N + Y +PP GRP
Sbjct: 426 TPLPPAAPQQPEEAMSYAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRP 484

Query: 370 YFKPTPFPGARG 405
              P P  GA G
Sbjct: 485 NSGPPPSYGAGG 496


>UniRef50_Q9VBZ2 Cluster: CG11786-PA; n=1; Drosophila
           melanogaster|Rep: CG11786-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 208

 Score = 37.5 bits (83), Expect = 0.45
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +1

Query: 205 TPNP-FFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKP 381
           TP P +   P  G  Y P  N  Y+  P  +Y P    Y P      Y  PP   P++KP
Sbjct: 58  TPAPEYLPPPNNGYQYNPPPNNNYLPPPNNNYLPPPPEYGPPAGYPSYGPPPP--PFYKP 115

Query: 382 TPF 390
            PF
Sbjct: 116 APF 118


>UniRef50_Q1DWE3 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 442

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 25/63 (39%), Positives = 28/63 (44%)
 Frame = +1

Query: 208 PNPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTP 387
           PNP +AQP    G +P    P    PP+ Y P   GY P     Y   PPQG P     P
Sbjct: 16  PNPAYAQP----GQQPPQQPPPHGAPPQGYYPPPQGYPP---QGY---PPQGYPPQGQYP 65

Query: 388 FPG 396
            PG
Sbjct: 66  PPG 68


>UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain;
           n=3; Danio rerio|Rep: Type IV collagen alpha 4 chain -
           Danio rerio
          Length = 1639

 Score = 34.3 bits (75), Expect = 4.2
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +1

Query: 250 EPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPGARG 405
           +P++++ Y++  P D  P GN   P D G   +  P G P       PGA G
Sbjct: 301 KPVESQKYVIGLPGDPGPPGNPGAPGDRGLMGIPGPSGDPGLS---LPGAMG 349


>UniRef50_A5AY32 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 382

 Score = 34.3 bits (75), Expect = 4.2
 Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
 Frame = +1

Query: 226 QPTVGNGYEPIDNRPYIVNPP--KDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPG 396
           Q   G    P DN  Y  N P    YN  G GY     G  Y  P     Y +P P PG
Sbjct: 94  QQAHGGPSGPADNSGYNYNQPPASGYNQQGQGYPQDGYGGGYHAPAPQPGYGQPQPIPG 152


>UniRef50_UPI0000E49F56 Cluster: PREDICTED: similar to annexin A6;
           n=3; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to annexin A6 - Strongylocentrotus purpuratus
          Length = 302

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 19/55 (34%), Positives = 20/55 (36%)
 Frame = +1

Query: 229 PTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 393
           P    GY      P     P  Y P G GY P   G Y   PP G   + P P P
Sbjct: 20  PPQAGGYPQPGGYPQ-APAPAGYPPQGGGYPPAAGGGY--PPPAGAGGYPPAPAP 71


>UniRef50_A7EUK1 Cluster: Putative uncharacterized protein; n=1;
            Sclerotinia sclerotiorum 1980|Rep: Putative
            uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 2000

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 238  GNGYEPIDNRPYIVNPPKDYN-PNGNGYEPIDNGAYYVDPPQGRP 369
            G+GYEP  +  Y    P  YN P GN YEP  +  Y  +PP   P
Sbjct: 1683 GSGYEPPSSTGY--ETPTGYNTPTGNSYEPPSSTGY--EPPSYGP 1723


>UniRef50_UPI0000E499B2 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=2; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to conserved
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 446

 Score = 33.1 bits (72), Expect = 9.7
 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
 Frame = +1

Query: 247 YEPIDNRPYIVNPPKD---YNPNGN-GYEPIDNGAYYVDPPQGRPYFKPTPFPG 396
           Y P   +P  V PP     Y P G  GY P    AY   PP G+P + P   PG
Sbjct: 274 YAPYAGQPISVYPPAGQPGYPPTGPPGYPPTGQPAY---PPAGQPGYPPAEQPG 324


>UniRef50_Q1ZXG9 Cluster: Argonaut-like protein; n=1; Dictyostelium
           discoideum AX4|Rep: Argonaut-like protein -
           Dictyostelium discoideum AX4
          Length = 1295

 Score = 33.1 bits (72), Expect = 9.7
 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
 Frame = +1

Query: 211 NPFFAQPTVGNGYEPIDNRPYIVNPPKD--YNPNGNGYEPID--NGAYYVDPPQ-GRPYF 375
           +P   Q     GY P     Y   PP    Y P   GY+P     G YY  PP  G  Y+
Sbjct: 150 SPPLPQQQQQGGYYPPPQHGYYPPPPPQGGYYPPPYGYDPYGPPQGGYYPPPPPYGYGYY 209

Query: 376 KPTP 387
            P P
Sbjct: 210 PPPP 213


>UniRef50_A0BRA8 Cluster: Chromosome undetermined scaffold_122,
           whole genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_122,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 452

 Score = 33.1 bits (72), Expect = 9.7
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = +1

Query: 229 PTVGNGYEPIDNRPYIVNPPKDYNPN-GNGYEPIDNGAYYVDPPQGRPYFKPTPFPGARG 405
           P     Y P  N  Y  N P  YNPN   GY P    +  ++ PQ +P   P   P  + 
Sbjct: 235 PNQPPNYPPNQNPNYPPNQPPGYNPNQPQGYNPNQPPSQTLNYPQNQPPNYPPNMPPNQQ 294

Query: 406 G 408
           G
Sbjct: 295 G 295


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,924,837
Number of Sequences: 1657284
Number of extensions: 13229627
Number of successful extensions: 28795
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 27168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28685
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)