Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_N22
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50311-10|AAA92314.1|  135|Caenorhabditis elegans Inhibitor of s...    38   0.012
Z79756-10|CAL36507.1|   80|Caenorhabditis elegans Hypothetical p...    37   0.016
U50311-8|AAA92312.1|  145|Caenorhabditis elegans Hypothetical pr...    37   0.022
U50311-11|AAN84861.1|   86|Caenorhabditis elegans Inhibitor of s...    33   0.27 
U42830-3|AAC48275.1|  195|Caenorhabditis elegans Hypothetical pr...    32   0.61 
Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical p...    29   3.3  
AF016668-4|AAO12440.1|  222|Caenorhabditis elegans Hypothetical ...    29   3.3  
AC024817-39|AAP68916.1|  128|Caenorhabditis elegans Hypothetical...    29   3.3  
Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U50311-9|AAA92313.1|  137|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z98877-6|CAD56617.1|  432|Caenorhabditis elegans Hypothetical pr...    28   10.0 
Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical pr...    28   10.0 
Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical pr...    28   10.0 
Z66561-8|CAI79121.1|  137|Caenorhabditis elegans Hypothetical pr...    28   10.0 
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>U50311-10|AAA92314.1|  135|Caenorhabditis elegans Inhibitor of
           serine protease likeprotein protein 2, isoform a
           protein.
          Length = 135

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +1

Query: 223 MTPCVRTCDDPY-LTNTACVG-ALIQTCHCNDGLVFNADRKCVPISDC 360
           +  C  TC+     T  AC    ++ TC C DG V N+  KCV +S+C
Sbjct: 26  LVSCHNTCEPQCGYTPKACTEQCIMNTCDCKDGFVRNSLGKCVEVSEC 73


>Z79756-10|CAL36507.1|   80|Caenorhabditis elegans Hypothetical
           protein F53C11.9 protein.
          Length = 80

 Score = 37.1 bits (82), Expect = 0.016
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 226 TPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNAD-RKCVPISDC 360
           +PC RTC++P   N  C+      C C  G V +++ +KC+ +  C
Sbjct: 34  SPCDRTCENP---NPMCIQMCKARCECKQGFVVDSNTKKCIDLKKC 76


>U50311-8|AAA92312.1|  145|Caenorhabditis elegans Hypothetical
           protein C25E10.7 protein.
          Length = 145

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +1

Query: 226 TPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPISDC*N 366
           T C  TCDDPY T+      +   C C  GLV N+   C  + +C N
Sbjct: 89  TLCQPTCDDPYPTSCEHDRCIRNVCRCLPGLVRNSG-TCTSLDECDN 134


>U50311-11|AAN84861.1|   86|Caenorhabditis elegans Inhibitor of
           serine protease likeprotein protein 2, isoform b
           protein.
          Length = 86

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 289 IQTCHCNDGLVFNADRKCVPISDC 360
           + TC C DG V N+  KCV +S+C
Sbjct: 1   MNTCDCKDGFVRNSLGKCVEVSEC 24


>U42830-3|AAC48275.1|  195|Caenorhabditis elegans Hypothetical
           protein C53B7.2 protein.
          Length = 195

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 232 CVRTCDDPYLTNTAC-VGALIQTCHCNDGLVFNADRKCVPISDC 360
           C  TC+ P   N  C V     +C C  G V++  R+C+P + C
Sbjct: 42  CPPTCESP---NPQCRVDCTRPSCTCLPGHVYSNSRQCIPANSC 82


>Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical
           protein Y69H2.10b protein.
          Length = 975

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
 Frame = +1

Query: 223 MTPCVRTCDDP----YLTNTACVGALIQTCHCNDGLVFNADRKCVPISDC 360
           MT C+  C +      L  T C     Q C C  G + ++D +C    DC
Sbjct: 746 MTDCLNPCSEDKCPGILKKTECTNRCGQGCACAYGYLRSSDGECYKPKDC 795


>AF016668-4|AAO12440.1|  222|Caenorhabditis elegans Hypothetical
           protein F36H9.4 protein.
          Length = 222

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +1

Query: 226 TPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPI 351
           T C   C + ++     +  ++  C C DG   N D+KC  +
Sbjct: 35  TACEANCAEGHVM-FCTMQCIVNVCQCKDGFFRNKDKKCAHV 75


>AC024817-39|AAP68916.1|  128|Caenorhabditis elegans Hypothetical
           protein Y54G2A.36 protein.
          Length = 128

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +1

Query: 274 CVGALIQTCHCN---DGLVFNADRKCVPISDC 360
           C+GAL+ TC+CN   DG     D  C   + C
Sbjct: 40  CIGALVGTCNCNSCVDGWPCQEDSACGGFNRC 71


>Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical
           protein Y69H2.3b protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 274 CVGALIQTCHCNDGLVFNADRKCVPISDC 360
           C+    + C C  GLV N   +CV +++C
Sbjct: 256 CMMRCEKACSCKKGLVRNRQGQCVKLAEC 284



 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
 Frame = +1

Query: 229 PCV-RTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPISDC 360
           PC  + C         C+ A    C C DG V N    CV  ++C
Sbjct: 111 PCTEKKCPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAEC 155


>U50311-9|AAA92313.1|  137|Caenorhabditis elegans Hypothetical
           protein C25E10.8 protein.
          Length = 137

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
 Frame = +1

Query: 223 MTPCVRTCDDPY-LTNTACVGA--LIQTCHCNDGLVFNADRKCVPISDC 360
           M  C   C+     T   C+ A  +   C C  G V N+  KCV IS C
Sbjct: 27  MVACHDHCETQCGYTPKVCLSAQCIENACDCKKGFVRNSLGKCVDISTC 75


>Z98877-6|CAD56617.1|  432|Caenorhabditis elegans Hypothetical
           protein Y69H2.3d protein.
          Length = 432

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
 Frame = +1

Query: 229 PCV-RTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPISDC 360
           PC  + C         C+ A    C C DG V N    CV  ++C
Sbjct: 111 PCTEKKCPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAEC 155


>Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical
           protein Y69H2.3c protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
 Frame = +1

Query: 229 PCV-RTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPISDC 360
           PC  + C         C+ A    C C DG V N    CV  ++C
Sbjct: 111 PCTEKKCPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAEC 155


>Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical
           protein Y69H2.3a protein.
          Length = 537

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
 Frame = +1

Query: 229 PCV-RTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPISDC 360
           PC  + C         C+ A    C C DG V N    CV  ++C
Sbjct: 111 PCTEKKCPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAEC 155


>Z66561-8|CAI79121.1|  137|Caenorhabditis elegans Hypothetical
           protein F08G12.11 protein.
          Length = 137

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1

Query: 232 CVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKC 342
           C  T D+P +   +C G L++ C C      N +  C
Sbjct: 28  CTLTVDNPGINTKSCEGYLMEECACVQRRSVNFEYDC 64


>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical
           protein ZK783.1 protein.
          Length = 2585

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 265 NTACVGALIQTCHCNDGLVFNADRKCVPISDC 360
           N  C  A   TC C DG   +  +KCV I++C
Sbjct: 393 NAICSNA---TCACIDGFRGDPHKKCVDINEC 421


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,679,200
Number of Sequences: 27780
Number of extensions: 252133
Number of successful extensions: 602
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)