Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_N21
         (806 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma j...    34   4.8  

>UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC03138 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 156

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 36/119 (30%), Positives = 36/119 (30%), Gaps = 2/119 (1%)
 Frame = -1

Query: 497 FFFXKKKXXXPXXXXLXPPXXXXXXPPXXXRGGXXXGVXPPKXXGXXXXXRGPPXXGGXX 318
           FFF KKK   P      PP      PP         G   P   G      GPP  GG  
Sbjct: 40  FFFNKKKRPPPPPGGPPPPFGGGGFPPFFHFFPPPGGGVAPPQGG------GPPLGGGGF 93

Query: 317 XXXXXXKXRGKGXGPXXFFF--XEXFFGXNEFXPNXXXLFXETSXXGPXDHGGPXQXYP 147
                    GK      FFF     FFG   F P     F   S   P   GGP    P
Sbjct: 94  QFFFKGFLPGKIFLGSFFFFGGNPPFFGG--FPPKRGGFFFGFSLF-PLSRGGPLSFPP 149


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,752,717
Number of Sequences: 1657284
Number of extensions: 2678148
Number of successful extensions: 1804
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)