Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_N17
         (1270 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1013 - 7931756-7935109                                           29   5.9  

>06_01_1013 - 7931756-7935109
          Length = 1117

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 20/81 (24%), Positives = 26/81 (32%)
 Frame = +2

Query: 374 PLKPPTARAXXXXKXRXTXXXPEPXNAXXAAPRRXSPRLXXXXTXAQXXPXPQXPXPHEX 553
           P+  P++RA    +       P P  A   AP R  P L      ++  P  Q   P   
Sbjct: 18  PVAVPSSRAVWRPRST-APDIPPPPRAAAPAPDRIGPILPSPNPASEDRPQQQQRRPRRR 76

Query: 554 PXXGXXXAXXPPXTXXXPXPP 616
              G      PP       PP
Sbjct: 77  NHGGGGQRRGPPQERPSAAPP 97


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.316    0.133    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,366,536
Number of Sequences: 37544
Number of extensions: 201434
Number of successful extensions: 338
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3934202376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)