BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_N14
(895 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 30 0.11
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 27 0.77
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 27 1.0
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 26 1.8
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 25 4.1
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 25 4.1
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 25 4.1
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 24 7.2
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 24 7.2
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 29.9 bits (64), Expect = 0.11
Identities = 22/81 (27%), Positives = 23/81 (28%), Gaps = 6/81 (7%)
Frame = +3
Query: 600 PXRXPPPPPPXXXXK------XXPPXXXXGLXXXPXXXXXXKXPXXXLPPXXNXXPPPPX 761
P PPPPPP PP P + P P N PPP
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFP-AGFPNLPNAQPPPAP 585
Query: 762 XXXXXXPPPPXPGXGXXXXXP 824
PPP P G P
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGP 606
Score = 25.4 bits (53), Expect = 2.3
Identities = 11/35 (31%), Positives = 13/35 (37%)
Frame = +3
Query: 525 KXPXXPNXXXKAXXPXXGXXXPXXXPXRXPPPPPP 629
+ P P + P P P PPPPPP
Sbjct: 556 RAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPP 590
Score = 25.0 bits (52), Expect = 3.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 725 PPPXKXPPPPPXXXXXXXPPPPXPGXGXXXXXPP 826
PPP PPPPP P P G PP
Sbjct: 581 PPPA--PPPPPPMGPPPSPLAGGPLGGPAGSRPP 612
Score = 24.6 bits (51), Expect = 4.1
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +2
Query: 683 PPXGXXXXXXXXXXPPPXKXPPPPPXXXXXXXPPPPXP 796
PP G P PPPPP PP P
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIPPQFLP 549
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 27.1 bits (57), Expect = 0.77
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Frame = -2
Query: 798 PGXGGGGXXXXXXXGGG---GGCXXGGG 724
PG GGGG GGG GG GGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGG 227
Score = 27.1 bits (57), Expect = 0.77
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 825 GGXXXXXPXPGXGGGGXXXXXXXGGGGG 742
GG PG GGG GGGGG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGGG 230
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 26.6 bits (56), Expect = 1.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 795 GXGGGGXXXXXXXGGGGGCXXGGG 724
G GG G GGGGG GGG
Sbjct: 551 GRGGVGSGIGGGGGGGGGGRAGGG 574
Score = 26.2 bits (55), Expect = 1.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 795 GXGGGGXXXXXXXGGGGGCXXGGG 724
G G GG G GGG GGG
Sbjct: 841 GGGAGGPLRGSSGGAGGGSSGGGG 864
Score = 25.8 bits (54), Expect = 1.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -2
Query: 825 GGXXXXXPXPGXGGGGXXXXXXXGGGGGCXXGG 727
GG P G GG GG GG GG
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGGG 872
Score = 25.4 bits (53), Expect = 2.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 795 GXGGGGXXXXXXXGGGGGCXXGGG 724
G GG G GG GG GGG
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGG 863
Score = 23.8 bits (49), Expect = 7.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 795 GXGGGGXXXXXXXGGGGGCXXGGG 724
G GGGG GGGGG GGG
Sbjct: 294 GVGGGG-------GGGGGGGGGGG 310
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 25.8 bits (54), Expect = 1.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 789 GGGGXXXXXXXGGGGGCXXGGG 724
GGG GGGGG GGG
Sbjct: 190 GGGTNGCTKAGGGGGGTGTGGG 211
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 24.6 bits (51), Expect = 4.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 804 PXPGXGGGGXXXXXXXGGGGGCXXGGG 724
P G GGGG GGGGG GG
Sbjct: 650 PGSGGGGGG------GGGGGGSVGSGG 670
Score = 24.6 bits (51), Expect = 4.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 795 GXGGGGXXXXXXXGGGGGCXXGGG 724
G GGGG GG G GGG
Sbjct: 656 GGGGGGGGGSVGSGGIGSSSLGGG 679
Score = 23.8 bits (49), Expect = 7.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 795 GXGGGGXXXXXXXGGGGGCXXGGG 724
G GGGG GGGGG GGG
Sbjct: 294 GVGGGG-------GGGGGGGGGGG 310
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 24.6 bits (51), Expect = 4.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 795 GXGGGGXXXXXXXGGGGGCXXGG 727
G GGGG GGG G GG
Sbjct: 555 GGGGGGGGGGGGVGGGIGLSLGG 577
Score = 24.2 bits (50), Expect = 5.4
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 795 GXGGGGXXXXXXXGGGGGCXXGGG 724
G GGGG GGGGG GGG
Sbjct: 553 GGGGGG------GGGGGGGGVGGG 570
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 24.6 bits (51), Expect = 4.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 795 GXGGGGXXXXXXXGGGGGCXXGG 727
G GGGG GGG G GG
Sbjct: 556 GGGGGGGGGGGGVGGGIGLSLGG 578
Score = 24.2 bits (50), Expect = 5.4
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 795 GXGGGGXXXXXXXGGGGGCXXGGG 724
G GGGG GGGGG GGG
Sbjct: 554 GGGGGG------GGGGGGGGVGGG 571
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 23.8 bits (49), Expect = 7.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 795 GXGGGGXXXXXXXGGGGGCXXGGG 724
G GGGG GGG G G G
Sbjct: 63 GYGGGGRGGRGGRGGGRGRGRGRG 86
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 23.8 bits (49), Expect = 7.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 795 GXGGGGXXXXXXXGGGGGCXXGGG 724
G GGGG GGGGG GGG
Sbjct: 246 GVGGGG-------GGGGGGGGGGG 262
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,474
Number of Sequences: 2352
Number of extensions: 10780
Number of successful extensions: 174
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -