Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_N13
         (879 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90568-1|CAA62188.1|26926|Homo sapiens titin protein.                  31   7.3  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                31   7.3  
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.    31   7.3  
AC010894-2|AAY14708.1|  503|Homo sapiens unknown protein.              31   7.3  

>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
          Length = 26926

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 174  TARXSLILPKPPTLMXTAPHLSTTVHLTWTVPKAD 278
            TAR  +  P PP  +        TVHL+W  PK D
Sbjct: 9507 TARDPIYPPDPPIKLKIGLITKNTVHLSWKPPKND 9541


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 174   TARXSLILPKPPTLMXTAPHLSTTVHLTWTVPKAD 278
             TAR  +  P PP  +        TVHL+W  PK D
Sbjct: 16931 TARDPIYPPDPPIKLKIGLITKNTVHLSWKPPKND 16965


>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
          Length = 26926

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 174  TARXSLILPKPPTLMXTAPHLSTTVHLTWTVPKAD 278
            TAR  +  P PP  +        TVHL+W  PK D
Sbjct: 9507 TARDPIYPPDPPIKLKIGLITKNTVHLSWKPPKND 9541


>AC010894-2|AAY14708.1|  503|Homo sapiens unknown protein.
          Length = 503

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 167 LANRPXIVNPPKASNPXGNGSAPLDNGASYVDRPQGRPYFKPT--PFPGARG 316
           + ++P  + PP  S P    S+P + G+  V     +P   PT  PFPG RG
Sbjct: 176 VGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRG 227


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,270,215
Number of Sequences: 237096
Number of extensions: 1244321
Number of successful extensions: 6812
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6791
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)