Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_N12
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118777-1|AAM50637.1|   94|Drosophila melanogaster GH11984p pro...    54   3e-07
AE014297-828|AAF54297.1|   94|Drosophila melanogaster CG8369-PA ...    54   3e-07
AY069725-1|AAL39870.1|  321|Drosophila melanogaster LP03067p pro...    46   7e-05
AE014296-2375|AAF49748.1|  321|Drosophila melanogaster CG7924-PA...    46   7e-05
BT023002-1|AAY55418.1|  145|Drosophila melanogaster IP08468p pro...    42   0.001
AE014297-2551|AAF55572.1|  145|Drosophila melanogaster CG7695-PA...    42   0.001
AY060461-1|AAL25500.1|   80|Drosophila melanogaster SD04019p pro...    40   0.005
AE014297-2907|AAF55833.2|   80|Drosophila melanogaster CG17278-P...    40   0.005
AE014298-1832|AAF48218.2|  418|Drosophila melanogaster CG12716-P...    36   0.057
AE014297-408|AAF51914.1|  730|Drosophila melanogaster CG1077-PA ...    36   0.057
BT029695-1|ABL75752.1|   83|Drosophila melanogaster IP17431p pro...    33   0.53 
BT030239-1|ABN49378.1|  126|Drosophila melanogaster IP18262p pro...    31   2.1  
BT009977-1|AAQ22446.1| 1287|Drosophila melanogaster RE56428p pro...    31   2.8  
AJ249606-1|CAB56505.1| 1287|Drosophila melanogaster NPC1 protein...    31   2.8  
AE014134-1780|AAF52874.2| 1287|Drosophila melanogaster CG5722-PA...    31   2.8  
BT003621-1|AAO39624.1|  767|Drosophila melanogaster GH04473p pro...    30   4.9  
AF454393-1|AAL51006.1|  705|Drosophila melanogaster follistatin ...    30   4.9  
AE013599-2026|AAF58158.2|  767|Drosophila melanogaster CG33466-P...    30   4.9  
AE014297-2348|ABC66180.1|  151|Drosophila melanogaster CG34053-P...    29   8.6  

>AY118777-1|AAM50637.1|   94|Drosophila melanogaster GH11984p
           protein.
          Length = 94

 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
 Frame = +1

Query: 208 ACMHDCTKANLDPICA-GKTGEKPK--SFGNECVMNNYNCEH-KDTLRKISQGQCPGSDG 375
           +C H+C +   +P+CA  K   K +  +FG+ CVM NYNC+H  D   + S+G+C G   
Sbjct: 32  SCQHNCGEV-YEPVCAKAKNSSKERLLTFGSPCVMANYNCQHADDPFEQKSKGECGGGVS 90

Query: 376 IRLS 387
           +RLS
Sbjct: 91  VRLS 94


>AE014297-828|AAF54297.1|   94|Drosophila melanogaster CG8369-PA
           protein.
          Length = 94

 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
 Frame = +1

Query: 208 ACMHDCTKANLDPICA-GKTGEKPK--SFGNECVMNNYNCEH-KDTLRKISQGQCPGSDG 375
           +C H+C +   +P+CA  K   K +  +FG+ CVM NYNC+H  D   + S+G+C G   
Sbjct: 32  SCQHNCGEV-YEPVCAKAKNSSKERLLTFGSPCVMANYNCQHADDPFEQKSKGECGGGVS 90

Query: 376 IRLS 387
           +RLS
Sbjct: 91  VRLS 94


>AY069725-1|AAL39870.1|  321|Drosophila melanogaster LP03067p
           protein.
          Length = 321

 Score = 46.0 bits (104), Expect = 7e-05
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +1

Query: 211 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKD-TLRKISQGQC 360
           C   CTK    PICA   G     F N+CVMN +NC+H+D + R + +  C
Sbjct: 256 CDELCTKFEYSPICA-HNGICIHEFANQCVMNTFNCKHRDLSFRAVDEDVC 305


>AE014296-2375|AAF49748.1|  321|Drosophila melanogaster CG7924-PA
           protein.
          Length = 321

 Score = 46.0 bits (104), Expect = 7e-05
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +1

Query: 211 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKD-TLRKISQGQC 360
           C   CTK    PICA   G     F N+CVMN +NC+H+D + R + +  C
Sbjct: 256 CDELCTKFEYSPICA-HNGICIHEFANQCVMNTFNCKHRDLSFRAVDEDVC 305


>BT023002-1|AAY55418.1|  145|Drosophila melanogaster IP08468p
           protein.
          Length = 145

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = +1

Query: 202 KKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 360
           K +C  +C     DP+CA    E+  +F NEC M NY C ++     IS G+C
Sbjct: 88  KPSCTKECPDI-YDPVCAQIFQEEYLTFSNECEMRNYICTNERPYSFISVGEC 139


>AE014297-2551|AAF55572.1|  145|Drosophila melanogaster CG7695-PA
           protein.
          Length = 145

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = +1

Query: 202 KKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 360
           K +C  +C     DP+CA    E+  +F NEC M NY C ++     IS G+C
Sbjct: 88  KPSCTKECPDI-YDPVCAQIFQEEYLTFSNECEMRNYICTNERPYSFISVGEC 139


>AY060461-1|AAL25500.1|   80|Drosophila melanogaster SD04019p
           protein.
          Length = 80

 Score = 39.9 bits (89), Expect = 0.005
 Identities = 20/66 (30%), Positives = 27/66 (40%)
 Frame = +1

Query: 166 LDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKI 345
           L L Q     +    C+ +C       ICA       K++ N CVM   NC      +KI
Sbjct: 15  LSLVQCLGLPDPSTKCVMECDTQEYRSICAADDKGSTKTYRNLCVMKTENCLQNANFQKI 74

Query: 346 SQGQCP 363
           S  +CP
Sbjct: 75  SDKECP 80


>AE014297-2907|AAF55833.2|   80|Drosophila melanogaster CG17278-PA
           protein.
          Length = 80

 Score = 39.9 bits (89), Expect = 0.005
 Identities = 20/66 (30%), Positives = 27/66 (40%)
 Frame = +1

Query: 166 LDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKI 345
           L L Q     +    C+ +C       ICA       K++ N CVM   NC      +KI
Sbjct: 15  LSLVQCLGLPDPSTKCVMECDTQEYRSICAADDKGSTKTYRNLCVMKTENCLQNANFQKI 74

Query: 346 SQGQCP 363
           S  +CP
Sbjct: 75  SDKECP 80


>AE014298-1832|AAF48218.2|  418|Drosophila melanogaster CG12716-PA
           protein.
          Length = 418

 Score = 36.3 bits (80), Expect = 0.057
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +1

Query: 223 CTKANLDPICAGKT--GEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 360
           CT+    P+CA     G  P++F NEC M  + C  K  LR +  G C
Sbjct: 146 CTQVER-PVCALAEIGGAIPQTFANECEMRKHECHTKQVLRILHTGPC 192


>AE014297-408|AAF51914.1|  730|Drosophila melanogaster CG1077-PA
           protein.
          Length = 730

 Score = 36.3 bits (80), Expect = 0.057
 Identities = 20/61 (32%), Positives = 34/61 (55%)
 Frame = +1

Query: 223 CTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDGIRLS*TLKK 402
           CT+    P+CA   G K  +F NEC++N  N + +   R +S+G C G D  ++  + K+
Sbjct: 150 CTRI-YRPVCAMYAGVK-STFSNECLVNAENIKSQRNWRIVSEGLC-GEDSTKMKHSRKQ 206

Query: 403 Q 405
           +
Sbjct: 207 K 207


>BT029695-1|ABL75752.1|   83|Drosophila melanogaster IP17431p
           protein.
          Length = 83

 Score = 33.1 bits (72), Expect = 0.53
 Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
 Frame = +1

Query: 199 RKKACMHDCTKANLDPICAGKTGEKPK----SFGNECVMNNYNCEHKDTLRKISQGQC 360
           + + C +DC++  ++ +C GKT    +    ++ N C M+ + C+ ++  RK + G+C
Sbjct: 18  KSQNCNNDCSRIGINFLC-GKTVRNGREIRCTYRNPCEMHLHACQKREEWRKDTTGRC 74


>BT030239-1|ABN49378.1|  126|Drosophila melanogaster IP18262p
           protein.
          Length = 126

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 277 KSFGNECVMNNYNCEHKDTLRKISQGQC 360
           +SF + CVM  YNC+++   R I++  C
Sbjct: 86  RSFASSCVMRMYNCKYQKDYRIIAERAC 113


>BT009977-1|AAQ22446.1| 1287|Drosophila melanogaster RE56428p
           protein.
          Length = 1287

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
 Frame = -2

Query: 245 GSRLALVQSCMQAFLRSASAFTCFRSSLSGRHDTATNNTAKAQE---NNGLHIGTKLMN 78
           G+ L    SCM+  +R    FTC        H  AT    K  E   +  LHI T+ +N
Sbjct: 100 GNILDRCPSCMENLVRHICQFTCSPKQAEFMHVVATQKNKKGDEYISSVDLHISTEYIN 158


>AJ249606-1|CAB56505.1| 1287|Drosophila melanogaster NPC1 protein
           protein.
          Length = 1287

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
 Frame = -2

Query: 245 GSRLALVQSCMQAFLRSASAFTCFRSSLSGRHDTATNNTAKAQE---NNGLHIGTKLMN 78
           G+ L    SCM+  +R    FTC        H  AT    K  E   +  LHI T+ +N
Sbjct: 100 GNILDRCPSCMENLVRHICQFTCSPKQAEFMHVVATQKNKKGDEYISSVDLHISTEYIN 158


>AE014134-1780|AAF52874.2| 1287|Drosophila melanogaster CG5722-PA
           protein.
          Length = 1287

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
 Frame = -2

Query: 245 GSRLALVQSCMQAFLRSASAFTCFRSSLSGRHDTATNNTAKAQE---NNGLHIGTKLMN 78
           G+ L    SCM+  +R    FTC        H  AT    K  E   +  LHI T+ +N
Sbjct: 100 GNILDRCPSCMENLVRHICQFTCSPKQAEFMHVVATQKNKKGDEYISSVDLHISTEYIN 158


>BT003621-1|AAO39624.1|  767|Drosophila melanogaster GH04473p
           protein.
          Length = 767

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/72 (22%), Positives = 31/72 (43%)
 Frame = +1

Query: 145 VSCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEH 324
           + C P    L  ++    R   C + C +    P+     G   +++ + C M+ ++CE 
Sbjct: 697 IKCGPKDNCLVDLQTRQPRCVTCRYKCPRKQQRPVHK-ICGYNNQTYNSWCEMHKHSCES 755

Query: 325 KDTLRKISQGQC 360
           +  +   SQG C
Sbjct: 756 RYFIGVKSQGSC 767


>AF454393-1|AAL51006.1|  705|Drosophila melanogaster follistatin
           protein.
          Length = 705

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/72 (22%), Positives = 31/72 (43%)
 Frame = +1

Query: 145 VSCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEH 324
           + C P    L  ++    R   C + C +    P+     G   +++ + C M+ ++CE 
Sbjct: 635 IKCGPKDNCLVDLQTRQPRCVTCRYKCPRKQQRPVHK-ICGYNNQTYNSWCEMHKHSCES 693

Query: 325 KDTLRKISQGQC 360
           +  +   SQG C
Sbjct: 694 RYFIGVKSQGSC 705


>AE013599-2026|AAF58158.2|  767|Drosophila melanogaster CG33466-PA
           protein.
          Length = 767

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/72 (22%), Positives = 31/72 (43%)
 Frame = +1

Query: 145 VSCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEH 324
           + C P    L  ++    R   C + C +    P+     G   +++ + C M+ ++CE 
Sbjct: 697 IKCGPKDNCLVDLQTRQPRCVTCRYKCPRKQQRPVHK-ICGYNNQTYNSWCEMHKHSCES 755

Query: 325 KDTLRKISQGQC 360
           +  +   SQG C
Sbjct: 756 RYFIGVKSQGSC 767


>AE014297-2348|ABC66180.1|  151|Drosophila melanogaster CG34053-PA
           protein.
          Length = 151

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
 Frame = +1

Query: 184 KADAERKKACMHDCTKANLDPICA--------GKTGEKPKSFGNECVMNNYNCEHK 327
           K +  ++  C   C++    P+CA        G TG +  SFG+ C+++ Y C ++
Sbjct: 84  KEECTKEIYCPRWCSRG-APPVCAWFPYTDSNGNTGGRDMSFGSRCLLDMYACRNE 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,638,429
Number of Sequences: 53049
Number of extensions: 571440
Number of successful extensions: 1721
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1717
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)