Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_N11
(876 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 108 2e-22
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 88 3e-16
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 81 5e-14
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 66 8e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 50 8e-05
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.047
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.083
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 38 0.33
UniRef50_Q0DU90 Cluster: Os03g0199200 protein; n=1; Oryza sativa... 36 1.4
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.5
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.5
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_A5GT39 Cluster: Uncharacterized conserved membrane prot... 33 7.2
UniRef50_UPI0000F2D44D Cluster: PREDICTED: hypothetical protein;... 33 9.5
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 108 bits (260), Expect = 2e-22
Identities = 64/108 (59%), Positives = 69/108 (63%)
Frame = +1
Query: 313 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 492
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 493 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP 636
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL AP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAP 121
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 87.8 bits (208), Expect = 3e-16
Identities = 43/52 (82%), Positives = 44/52 (84%)
Frame = +1
Query: 481 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP 636
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP 53
Score = 58.0 bits (134), Expect = 3e-07
Identities = 28/57 (49%), Positives = 30/57 (52%)
Frame = +3
Query: 618 FPPGSSSCALLFRPCRLPDTCPPSPFGKRGAFSXLTX*VSXFXXRSSPPXWAVCXTP 788
FP + SCALLFRPCRLPDTCPP + F RS P WAVC P
Sbjct: 48 FPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNP 104
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 80.6 bits (190), Expect = 5e-14
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = +1
Query: 499 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP 636
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL AP
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAP 89
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 66.5 bits (155), Expect = 8e-10
Identities = 39/78 (50%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = -3
Query: 820 YRIRXXGRXKRGVXXTAQXGGDDLXXX*DTYXVXYEKAPRFPKGEGG-QVSGKRQGRNRR 644
YR R +RGV + + DT V YEKAPRFPKG+ QVSGKRQGRNRR
Sbjct: 16 YRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRR 75
Query: 643 AHEELPGGNAWYLYSPVG 590
AHE G + SPVG
Sbjct: 76 AHEGAAGEKSPASLSPVG 93
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -1
Query: 489 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 376
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 289 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 456
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 50.0 bits (114), Expect = 8e-05
Identities = 35/89 (39%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +1
Query: 574 VRGGETRQDYKDTRRFPLEAPRALSCSDPAAYRIPVRLLP-SGSVALSHXSRXRYLXSVV 750
VR GETRQD K P ALSCS+PA RIPV +GSVALSH S
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 751 GRPLXXGLXAXPPVXPDRCXLSGTIVLXP 837
+ PP P T+ L P
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSP 111
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +1
Query: 388 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 561
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 562 IDAQVRGGETRQDYKDTRRFPLEAP 636
I Q + +T+ +YK T FPL++P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSP 106
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 92 DPDMIRYIDEFGQTTTRMQ 148
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 408 HSKAVIRLSTESGDNAGKNM 467
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.047
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 287 SALMNRPTRGERRFAYW 337
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 359 ERGSGRAPNTQTASPRALADSLMQ 288
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 37.9 bits (84), Expect = 0.33
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 638 VRSPVPTLPLTGYLSAF 688
+RSPVPTLPLTGYLSAF
Sbjct: 1 MRSPVPTLPLTGYLSAF 17
Score = 35.9 bits (79), Expect = 1.4
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1
Query: 688 LPSGSVALSHXSRXRYLXSV 747
LPSGSVALSH SR RYL SV
Sbjct: 18 LPSGSVALSHSSRCRYLSSV 37
>UniRef50_Q0DU90 Cluster: Os03g0199200 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0199200 protein -
Oryza sativa subsp. japonica (Rice)
Length = 149
Score = 35.9 bits (79), Expect = 1.4
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 540 PPDEHHKNR-RSSQRWRNPTGL*RYQAFPPGSSSCALLFRPCRLPDTCPPSP 692
PP+E H++R R+S W T L R PG S L P LP PP P
Sbjct: 42 PPEEIHRSRWRTSPGWLTSTSLDRRPV--PGDSLATTLAGPAELPPRHPPRP 91
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 498 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 376
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.5
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 170 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 337
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.5
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 250 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 86
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_A5GT39 Cluster: Uncharacterized conserved membrane
protein; n=1; Synechococcus sp. RCC307|Rep:
Uncharacterized conserved membrane protein -
Synechococcus sp. (strain RCC307)
Length = 235
Score = 33.5 bits (73), Expect = 7.2
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 602 IKIPGVSPWKLLVRSPVPTLPLTGYLSAFSLREAWR 709
+ +P SPWK L + LP G S LRE WR
Sbjct: 14 LPVPWSSPWKQLRQDLARDLPAVGSASVLRLRELWR 49
>UniRef50_UPI0000F2D44D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 301
Score = 33.1 bits (72), Expect = 9.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 708 RHASRREKADRYPVSGRVGTGERTRSFQG 622
R ++RRE DR+ V G VG G R+ S +G
Sbjct: 75 RESTRREGGDRHTVQGHVGAGNRSESNRG 103
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,344,651
Number of Sequences: 1657284
Number of extensions: 14718928
Number of successful extensions: 40416
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 38833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40402
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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