Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_N11
         (876 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4663|AAF57085.1| 1105|Drosophila melanogaster CG12072-P...    29   6.4  
AE013599-2987|AAF57490.2| 1625|Drosophila melanogaster CG8908-PA...    29   6.4  
AE013599-2986|AAM68403.2| 1665|Drosophila melanogaster CG8908-PB...    29   6.4  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.4  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.4  

>AE014297-4663|AAF57085.1| 1105|Drosophila melanogaster CG12072-PA
           protein.
          Length = 1105

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
 Frame = +3

Query: 543 PDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSSCALLFRPCRLPDTC----PPSP 692
           P  HH ++ SS+   NP G   +   P G S  A    P R P  C    PP P
Sbjct: 161 PHSHHTHQPSSRTVGNPGGNGGFSPSPSGFSEVAPPAPPPRNPTACSAATPPPP 214


>AE013599-2987|AAF57490.2| 1625|Drosophila melanogaster CG8908-PA,
           isoform A protein.
          Length = 1625

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 602 IKIPGVSPWKLLVRSPVPTLPLTGYLSAF 688
           + + G  PW+LL+   VPTLP T ++  F
Sbjct: 338 VHLIGCLPWRLLLMGYVPTLPRTIFVCLF 366


>AE013599-2986|AAM68403.2| 1665|Drosophila melanogaster CG8908-PB,
           isoform B protein.
          Length = 1665

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 602 IKIPGVSPWKLLVRSPVPTLPLTGYLSAF 688
           + + G  PW+LL+   VPTLP T ++  F
Sbjct: 338 VHLIGCLPWRLLLMGYVPTLPRTIFVCLF 366


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 298 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 393
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 298 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 393
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,459,121
Number of Sequences: 53049
Number of extensions: 701693
Number of successful extensions: 1682
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)