Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_N09
         (829 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        27   0.18 
S73230-1|AAB30812.1|   35|Tribolium castaneum twist protein.           25   0.73 
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    25   0.73 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   6.8  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   6.8  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   6.8  
AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase l...    22   6.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.0  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 438 TVPINSSTLCATRTETGLLCSSRK 509
           T+ INS T+C T +  G+ C  +K
Sbjct: 146 TMEINSDTMCVTFSNLGIQCVKKK 169


>S73230-1|AAB30812.1|   35|Tribolium castaneum twist protein.
          Length = 35

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 520 IASSQKTENLKTCFXNLKQSFPTVES 597
           +   Q+T++L   F +L++S PT+ S
Sbjct: 3   VRERQRTQSLNEAFASLRKSIPTMPS 28


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 520 IASSQKTENLKTCFXNLKQSFPTVES 597
           +   Q+T++L   F +L++S PT+ S
Sbjct: 103 VRERQRTQSLNEAFASLRKSIPTMPS 128


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 582 PHCGIRQYLSLVEKCAKVDEMTSCIVKSLEEC 677
           P  GIR  LS   KC   D + +   +  E+C
Sbjct: 50  PWTGIRDALSEGNKCYSKDLLFNLPAQGSEDC 81


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 582 PHCGIRQYLSLVEKCAKVDEMTSCIVKSLEEC 677
           P  GIR  LS   KC   D + +   +  E+C
Sbjct: 50  PWTGIRDALSEGNKCYSKDLLFNLPAQGSEDC 81


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 582 PHCGIRQYLSLVEKCAKVDEMTSCIVKSLEEC 677
           P  GIR  LS   KC   D + +   +  E+C
Sbjct: 52  PWTGIRDALSEGNKCYSKDLLFNLPAQGSEDC 83


>AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase like
           protein E2 protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 582 PHCGIRQYLSLVEKCAKVDEMTSCIVKSLEEC 677
           P  GIR  LS   KC   D + +   +  E+C
Sbjct: 24  PWTGIRDALSEGNKCYSKDLLFNLPAQGSEDC 55


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 363 TAFQLSTLVTVLLENPRRVHRLAW 292
           T F L+    V +EN ++V + AW
Sbjct: 28  TFFGLAPYSLVRVENGKKVFKFAW 51


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 363 TAFQLSTLVTVLLENPRRVHRLAW 292
           T F L+    V +EN ++V + AW
Sbjct: 28  TFFGLAPYSLVRVENGKKVFKFAW 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,282
Number of Sequences: 336
Number of extensions: 3528
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)