Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_N09
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical ... 32 0.44
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 3.1
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 29 3.1
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 28 9.4
>AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical
protein F54E2.2 protein.
Length = 174
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +3
Query: 537 D*ESQDMLXKFETELPHCGIRQYLSLVEKCAKVDEMTSCIVKSLEECXHRPPQTWRNPDQ 716
D +S +E LP C ++ + K AK T C+ S + C H P T P Q
Sbjct: 79 DYQSNKQQESYEIGLPVCRLKFLTASCVKSAKCPSGTVCLDFSTQRCCHPMPGTCPTPTQ 138
Query: 717 V 719
+
Sbjct: 139 L 139
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 350 N*KAVSARCCRACVLCVGNEYANHINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 514
N V+ C V+ + ++ DA N T +LID K+GD +A+ +A G
Sbjct: 45 NGHTVAVACANNTVIYYDKK--GNVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 350 N*KAVSARCCRACVLCVGNEYANHINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 514
N V+ C V+ + ++ DA N T +LID K+GD +A+ +A G
Sbjct: 45 NGHTVAVACANNTVIYYDKK--GNVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 350 N*KAVSARCCRACVLCVGNEYANHINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 514
N V+ C V+ + ++ DA N T +LID K+GD +A+ +A G
Sbjct: 45 NGHTVAVACANNTVIYYDKK--GNVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 668 EGFHDTGGHLINFCAFFNKAQVLADSTVGKLC 573
E FHD I F F+ + ++A+ T+GK C
Sbjct: 3308 EAFHDCSADYIEF---FDSSDIMANKTLGKFC 3336
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 668 EGFHDTGGHLINFCAFFNKAQVLADSTVGKLC 573
E FHD I F F+ + ++A+ T+GK C
Sbjct: 3308 EAFHDCSADYIEF---FDSSDIMANKTLGKFC 3336
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 666 GISRYRRSSHQLLRIFQQGSSIGGFHSGEA 577
G S RR + QLL +FQ G+ GG +A
Sbjct: 393 GFSTLRREAPQLLNLFQAGAMGGGAFGSDA 422
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 666 GISRYRRSSHQLLRIFQQGSSIGGFHSGEA 577
G S RR + QLL +FQ G+ GG +A
Sbjct: 375 GFSTLRREAPQLLNLFQAGAMGGGAFGSDA 404
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 666 GISRYRRSSHQLLRIFQQGSSIGGFHSGEA 577
G S RR + QLL +FQ G+ GG +A
Sbjct: 393 GFSTLRREAPQLLNLFQAGAMGGGAFGSDA 422
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 666 GISRYRRSSHQLLRIFQQGSSIGGFHSGEA 577
G S RR + QLL +FQ G+ GG +A
Sbjct: 393 GFSTLRREAPQLLNLFQAGAMGGGAFGSDA 422
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 666 GISRYRRSSHQLLRIFQQGSSIGGFHSGEA 577
G S RR + QLL +FQ G+ GG +A
Sbjct: 375 GFSTLRREAPQLLNLFQAGAMGGGAFGSDA 404
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 666 GISRYRRSSHQLLRIFQQGSSIGGFHSGEA 577
G S RR + QLL +FQ G+ GG +A
Sbjct: 393 GFSTLRREAPQLLNLFQAGAMGGGAFGSDA 422
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,286,724
Number of Sequences: 27780
Number of extensions: 359318
Number of successful extensions: 1002
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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