Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_N08
(866 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 164 2e-41
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 137 2e-33
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 42 1e-04
SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr ... 33 0.070
SPBC2A9.10 |||Bin3 family|Schizosaccharomyces pombe|chr 2|||Manual 32 0.12
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 29 0.86
SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Sch... 27 3.5
SPAPB17E12.10c |||SAM-dependent methyltransferase|Schizosaccharo... 26 8.0
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 164 bits (398), Expect = 2e-41
Identities = 77/144 (53%), Positives = 99/144 (68%)
Frame = +2
Query: 380 GPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYKNAMYHNKHLFQGKTVLDIG 559
G K +T++DYYFDSY+H+GIHEEMLKD+VRTL+Y++A+ N HLF+ K VLD+G
Sbjct: 3 GNTKKSADSGLTAKDYYFDSYSHWGIHEEMLKDDVRTLSYRDAIMQNPHLFRDKIVLDVG 62
Query: 560 CGTGILSMFAAKAGATKVLXIECSNIVDYARKIIEANRLDDVIXIIKGKXXXXXXXXXXX 739
CGTGILSMF A+AGA V ++ S I+ A +I+E N+L D I +I+GK
Sbjct: 63 CGTGILSMFCARAGAKHVYGVDMSEIIHKAVQIVEVNKLSDRITLIQGKMEEIQLPVEKV 122
Query: 740 XIIISXWMGYCLFYXXMLDTVLYA 811
II+S WMGY L Y MLDTVL A
Sbjct: 123 DIIVSEWMGYFLLYESMLDTVLVA 146
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 137 bits (332), Expect = 2e-33
Identities = 70/140 (50%), Positives = 88/140 (62%)
Frame = +2
Query: 392 NVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYKNAMYHNKHLFQGKTVLDIGCGTG 571
+VT ++ + YYF+SYA IH ML D VRT Y++ +YHNKH+F GKTVLD+GCGTG
Sbjct: 208 SVTPKKADNDSYYFESYAGNDIHFLMLNDSVRTEGYRDFVYHNKHIFAGKTVLDVGCGTG 267
Query: 572 ILSMFAAKAGATKVLXIECSNIVDYARKIIEANRLDDVIXIIKGKXXXXXXXXXXXXIII 751
ILSMF AKAGA KV ++ S+I+ A N L D I I+GK III
Sbjct: 268 ILSMFCAKAGAKKVYAVDNSDIIQMAISNAFENGLADQITFIRGKIEDISLPVGKVDIII 327
Query: 752 SXWMGYCLFYXXMLDTVLYA 811
S WMGY L + M+D+VL A
Sbjct: 328 SEWMGYALTFESMIDSVLVA 347
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 41.9 bits (94), Expect = 1e-04
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 491 LTYKNAMYHNKHLFQGKTVLDIGCGTGILSMFAAKAGATKVLXIECSNI-VDYARK 655
L + ++ ++ F GK +LDIGCG GILS A+ GA+ V ++ S + ++ A+K
Sbjct: 63 LDFMTEVFRERNCFSGKKILDIGCGGGILSESMARLGAS-VTAVDASPMAIEVAKK 117
>SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 32.7 bits (71), Expect = 0.070
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 506 AMYHNKHLFQ-GKTVLDIGCGTGILSMFAAKAGATKVLXIECSNIVDYARKIIEANRLD 679
A Y +H Q G VL++G GTG++S+ AK G+ + + + D R+ N D
Sbjct: 160 AEYIYQHPVQSGMRVLELGAGTGLVSILCAKMGSIVLATDGDTKVCDGVRENARLNNCD 218
>SPBC2A9.10 |||Bin3 family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 268
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +2
Query: 527 LFQGKTVLDIGCGTGILS-MFAAKAGATKVLXIECSNI-VDYARKIIE 664
LF +VLDIGC G +S A+ GA+ VL ++ ++ + ARK +E
Sbjct: 33 LFYEASVLDIGCNNGTVSAQIASIFGASFVLGLDIDHVLIQKARKHLE 80
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 29.1 bits (62), Expect = 0.86
Identities = 22/88 (25%), Positives = 37/88 (42%)
Frame = +2
Query: 311 IKMETMDVAQEGTSTVSTPVVENGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRT 490
+K E D+ + G S+ S PVV +N+ EE+ Y G + + DE T
Sbjct: 302 LKSELRDLEKSGGSSNSKPVVVRPKKRNILTEEL--EKYKKSKKVVLGKRKNLENDEEST 359
Query: 491 LTYKNAMYHNKHLFQGKTVLDIGCGTGI 574
L ++ + + V+D G+ I
Sbjct: 360 LRALSSFQSKIRNAEDEDVMDSQYGSKI 387
>SPBC1347.09 |||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 284
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 377 NGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLK-DEVRTLTYKNAMYHNKHLF---QGKT 544
+ P ++ ++S+ F+ + + ++ K D+ R L + N + F G +
Sbjct: 21 DNPSTLAISKVISSKILQFEDNSETSLRHDLPKYDQDRLLLTSDDDLTNVNNFWKKSGMS 80
Query: 545 VLDIGCGTGILS 580
+LD CGTG++S
Sbjct: 81 ILDFACGTGLIS 92
>SPAPB17E12.10c |||SAM-dependent
methyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 536 GKTVLDIGCGTGILSMFAAK 595
G+ V+D+GC GI S AA+
Sbjct: 76 GQIVVDLGCAPGIWSTIAAR 95
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,941,238
Number of Sequences: 5004
Number of extensions: 55248
Number of successful extensions: 121
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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