Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_N08
         (866 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.6  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   3.6  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   3.6  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   3.6  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    23   3.6  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   3.6  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    23   3.6  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   3.6  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    23   3.6  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    23   4.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 15  PPPYSWXPLRLCIF 56
           PPP  W PL  C F
Sbjct: 416 PPPEDWKPLDKCYF 429


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP P+    FP
Sbjct: 123 NIEQIPVPVPVYYGNFP 139


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP P+    FP
Sbjct: 123 NIEQIPVPVPVYYGNFP 139


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP PI    FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP PI    FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP PI    FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP PI    FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP PI    FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP PI    FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP PI    FP
Sbjct: 119 NIEQIPVPVPIYCGNFP 135


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP PI    FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP PI    FP
Sbjct: 112 NIEQIPVPVPIYCGNFP 128


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP P+    FP
Sbjct: 123 NIEQIPVPVPVYYGNFP 139


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP PI    FP
Sbjct: 340 NIEQIPVPVPIYCGNFP 356


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP PI    FP
Sbjct: 353 NIEQIPVPVPIYCGNFP 369


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP P+    FP
Sbjct: 348 NIEQIPVPVPVYYGNFP 364


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 585 NIDRIPVPQPISRTVFP 535
           NI++IPVP P+    FP
Sbjct: 342 NIEQIPVPVPVYCGNFP 358


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,519
Number of Sequences: 438
Number of extensions: 3908
Number of successful extensions: 32
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)