Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_N07
(884 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 33 0.41
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 33 0.41
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 32 0.54
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 31 0.94
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 31 1.2
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 30 2.2
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 30 2.9
SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 3.8
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 5.0
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 5.0
SB_31227| Best HMM Match : RIO1 (HMM E-Value=0.13) 29 6.6
SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 32.7 bits (71), Expect = 0.41
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPP 765
PPPPP GGG PPPP
Sbjct: 663 PPPPPPPPGGGVPGPPKPPPP 683
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 702 PPPPXPXGGXGXXXXXXPPPP 764
PPPP P G G PPPP
Sbjct: 663 PPPPPPPPGGGVPGPPKPPPP 683
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPP 765
PPPPP GGG PPPP
Sbjct: 653 PPPPP---GGGMFPPPPPPPP 670
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 32.7 bits (71), Expect = 0.41
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 702 PPPPXPXGGXGXXXXXXPPPPP 767
PPPP P GG PPPPP
Sbjct: 304 PPPPPPPGGAPPPPPPPPPPPP 325
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 706 PPPPXGXGGGXXXXXXPPPPP 768
PPPP GG PPPPP
Sbjct: 304 PPPPPPPGGAPPPPPPPPPPP 324
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP G PPPPP
Sbjct: 304 PPPPPPPGGAPPPPPPPPPPPP 325
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 698 PPPPPXPXGXXGGXSXXXXPPPP 766
PPPPP P G PPPP
Sbjct: 315 PPPPPPPPPPPGDGGAPPPPPPP 337
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 698 PPPPPXPXGXXGGXSXXXXPPPP 766
PPPPP P G PPPP
Sbjct: 314 PPPPPPPPPPPPGDGGAPPPPPP 336
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
P PPP GG PPPPP
Sbjct: 302 PAPPPPPPPGGAPPPPPPPPPP 323
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP G PPPPP
Sbjct: 316 PPPPPPPPPPGDGGAPPPPPPP 337
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 32.3 bits (70), Expect = 0.54
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP GG PPPPP
Sbjct: 660 PPPPPPPPPGGQAGGAPPPPPP 681
Score = 32.3 bits (70), Expect = 0.54
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP GG PPPPP
Sbjct: 661 PPPPPPPPGGQAGGAPPPPPPP 682
Score = 31.5 bits (68), Expect = 0.94
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 698 PPPPPXPXGXXGGXSXXXXPPPP 766
PPPPP P G GG PP P
Sbjct: 662 PPPPPPPGGQAGGAPPPPPPPLP 684
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 698 PPPPPXPXGXXGGXSXXXXPPP 763
PPPPP P G G + PPP
Sbjct: 661 PPPPPPPPGGQAGGAPPPPPPP 682
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 702 PPPPXPXGGXGXXXXXXPPPPP 767
PPPP P G PPPPP
Sbjct: 660 PPPPPPPPPGGQAGGAPPPPPP 681
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 702 PPPPXPXGGXGXXXXXXPPPPP 767
PPPP P G PPPPP
Sbjct: 661 PPPPPPPPGGQAGGAPPPPPPP 682
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 698 PPPPPXPXGXXGGXSXXXXPPPP 766
PPPPP P GG + PPPP
Sbjct: 660 PPPPPPP--PPGGQAGGAPPPPP 680
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP G G PPP P
Sbjct: 663 PPPPPPGGQAGGAPPPPPPPLP 684
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 31.5 bits (68), Expect = 0.94
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 686 KKKXPPPPPXPXGXXGGXSXXXXPPPP 766
KK PPPPP P S PPPP
Sbjct: 674 KKVPPPPPPLPVIEGSSLSVPPPPPPP 700
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 686 KKKXPPPPPXPXGXXGGXSXXXXPPPP 766
K K PPPP P G S PPPP
Sbjct: 672 KLKKVPPPPPPLPVIEGSSLSVPPPPP 698
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 702 PPPPXPXGGXGXXXXXXPPPPP 767
PPPP P G PPPPP
Sbjct: 727 PPPPSPQPGCAGLPPPPPPPPP 748
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 698 PPPPPXPXGXXGGXSXXXXPPPP 766
PPPPP P G PPPP
Sbjct: 695 PPPPPPPPPLLSGTLPMPPPPPP 717
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 691 KXXXPPPPPXGXGGGXXXXXXPPPPP 768
K PPPPP G PPPPP
Sbjct: 674 KKVPPPPPPLPVIEGSSLSVPPPPPP 699
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP G PPPPP
Sbjct: 697 PPPPPPPLLSGTLPMPPPPPPP 718
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP G PPPPP
Sbjct: 698 PPPPPPLLSGTLPMPPPPPPPP 719
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP G PPPPP
Sbjct: 726 PPPPPSPQPGCAGLPPPPPPPP 747
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +1
Query: 688 KKXXXPPPP-PXGXGGGXXXXXXPPPPP 768
KK PPPP P G PPPPP
Sbjct: 674 KKVPPPPPPLPVIEGSSLSVPPPPPPPP 701
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 698 PPPPPXPXGXXGGXSXXXXPPPP 766
PPPPP P G PPPP
Sbjct: 696 PPPPPPPPLLSGTLPMPPPPPPP 718
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 698 PPPPPXPXGXXGGXSXXXXPPPP 766
PPPPP P G GG PPPP
Sbjct: 197 PPPPPPPPGFPGG--APPPPPPP 217
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 702 PPPPXPXGGXGXXXXXXPPPPP 767
PPPP P G PPPPP
Sbjct: 195 PPPPPPPPPPGFPGGAPPPPPP 216
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP G PPPPP
Sbjct: 195 PPPPPPPPPPGFPGGAPPPPPP 216
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP G PPPPP
Sbjct: 196 PPPPPPPPPGFPGGAPPPPPPP 217
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP G GG PPPPP
Sbjct: 195 PPPPPPGPGG-----IPPPPPP 211
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 705 PPPXPXGGXGXXXXXXPPPPP 767
PPP P GG PPPPP
Sbjct: 280 PPPMPPGGMPPNMEQPPPPPP 300
>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 702 PPPPXPXGGXGXXXXXXPPPPP 767
PPPP P G PPPPP
Sbjct: 755 PPPPPPPAVPGEGARPPPPPPP 776
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP G PPPPP
Sbjct: 756 PPPPPPAVPGEGARPPPPPPPP 777
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 698 PPPPPXPXGXXGGXSXXXXPPPP 766
PPPPP P G PPPP
Sbjct: 755 PPPPPPPAVPGEGARPPPPPPPP 777
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP G PPPPP
Sbjct: 755 PPPPPPPAVPGEGARPPPPPPP 776
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 702 PPPPXPXGGXGXXXXXXPPPPP 767
PP P P GG PPPPP
Sbjct: 971 PPLPPPPGGSAPPPPPPPPPPP 992
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 698 PPPPPXPXGXXGGXSXXXXPPPP 766
PPPPP P S PPPP
Sbjct: 1158 PPPPPPPPPPPSSPSPPPPPPPP 1180
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +2
Query: 677 FXXKKKXPPPPPXPXGXXGGXSXXXXPPPP 766
F + + PPPPP P PPPP
Sbjct: 1150 FSVRDQIPPPPPPPPPPPPSSPSPPPPPPP 1179
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 702 PPPPXPXGGXGXXXXXXPPPPP 767
PPPP P PPPPP
Sbjct: 1162 PPPPPPPSSPSPPPPPPPPPPP 1183
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 702 PPPPXPXGGXGXXXXXXPPPPP 767
PPPP P G PPPPP
Sbjct: 375 PPPPPPIEGRPPSSLGNPPPPP 396
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP G PPPPP
Sbjct: 375 PPPPPPIEGRPPSSLGNPPPPP 396
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP G PPPPP
Sbjct: 371 PPPPPPGRRPPSGKINPPPPPP 392
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 703 PPPPPXGXGGGXXXXXXPPPPP 768
PPPPP G PPPPP
Sbjct: 283 PPPPPPGRRPPSGKINPPPPPP 304
>SB_31227| Best HMM Match : RIO1 (HMM E-Value=0.13)
Length = 633
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 280 PPPXF*XGPPAXGGXPXF 333
PPP + GPPA GG P +
Sbjct: 265 PPPAYGGGPPAYGGAPNY 282
>SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 678 FXXKKKXXPPPPXPXGGXGXXXXXXPPPPP 767
F K PPPP P PPPPP
Sbjct: 677 FSSKPPLTPPPPLPTPIASSEPLPLPPPPP 706
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,329,007
Number of Sequences: 59808
Number of extensions: 251968
Number of successful extensions: 1680
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2526446612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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