Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_N06
(908 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 98 1e-20
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 73 4e-13
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 60 2e-09
06_01_0671 - 4899611-4899829,4900870-4901448 55 7e-08
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 52 8e-07
09_05_0015 - 20083143-20083308,20083645-20084017,20084362-200846... 33 0.31
12_01_0809 + 7422137-7422251,7425578-7426353 33 0.41
03_04_0011 + 16398093-16398170,16401321-16401806,16401892-164023... 31 0.96
02_01_0449 - 3229260-3229365,3230264-3230396,3230536-3230625,323... 30 2.2
01_06_1608 - 38612754-38616947,38617030-38617095 30 2.2
06_03_0251 + 18715023-18715106,18715274-18715396,18715509-187156... 30 2.9
06_01_0203 + 1555471-1555523,1555743-1555863,1556340-1556651,155... 29 3.9
03_01_0418 - 3211687-3211933,3212016-3212164,3212443-3212551,321... 29 5.1
06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849 29 6.7
04_01_0610 - 7997406-7998047,7998379-7998426,8000719-8001143,800... 29 6.7
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 97.9 bits (233), Expect = 1e-20
Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Frame = +2
Query: 206 APKVQKPAPDFSATAVVNGEFNQLKLSDFTGK-YVVLFFYPLDFTFVCPTELIAFSDKAK 382
AP V APDF A AV + EF +KLSD+ GK YV+LFFYPLDFTFVCPTE+ AFSD+
Sbjct: 67 APLVGNKAPDFDAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYD 126
Query: 383 DFAGIDCQVIGVSTDSEFS 439
+F ++ +++GVS DS +S
Sbjct: 127 EFEKLNTEILGVSIDSVWS 145
Score = 76.2 bits (179), Expect = 3e-14
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = +2
Query: 434 FSHLAWINTPRKDGGLGKMEIPLLADYKKQISKDYDVLL-DDGFALRGLFIIDRNGTL 604
FSHLAW+ T RK GGLG ++ PL++D K ISK + VL+ D G ALRGLFIID+ G +
Sbjct: 212 FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVI 269
Score = 69.7 bits (163), Expect = 3e-12
Identities = 31/59 (52%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +3
Query: 606 RHMSVNDLPVGRSVDETLRLVKAFQFA-DKHGEVCPAGWNPDTNADTIKPNPKDSKEYF 779
+H ++N+L +GRSVDET+R ++A Q+ D EVCPAGW P ++KP+PK SKEYF
Sbjct: 270 QHSTINNLAIGRSVDETMRTLQALQYVQDNPDEVCPAGWKPGDK--SMKPDPKGSKEYF 326
>04_03_0889 +
20568984-20569037,20569271-20569345,20569981-20570088,
20572066-20572179,20572393-20572509
Length = 155
Score = 72.5 bits (170), Expect = 4e-13
Identities = 32/59 (54%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +3
Query: 606 RHMSVNDLPVGRSVDETLRLVKAFQFADKH-GEVCPAGWNPDTNADTIKPNPKDSKEYF 779
+H ++N+L +GRSVDETLR ++A Q+ ++ EVCPAGW P ++KP+PKDSKEYF
Sbjct: 96 QHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKP--GEKSMKPDPKDSKEYF 152
Score = 34.3 bits (75), Expect = 0.14
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 338 FVCPTELIAFSDKAKDFAGIDCQVIGVSTDS 430
FV E+ AFSD+ ++F I+ +V+GVS DS
Sbjct: 48 FVSSAEITAFSDRYEEFEKINTEVLGVSIDS 78
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 509 DYKKQISKDYDVLLDD-GFALRGLFIIDRNGTL 604
+++K ++ V +D G ALRGLFIID+ G +
Sbjct: 63 EFEKINTEVLGVSIDSVGIALRGLFIIDKEGVI 95
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +2
Query: 272 QLKLSDFTGK-YVVLFFYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHLA 448
++++ DF G YV+LF +P DFT VC TEL A + AK+F +++G+S D SH
Sbjct: 56 KIRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKD 115
Query: 449 WINTPRKDGGLGKMEIPLLADYKKQISKDYDVLLDD 556
WI ++ P++AD ++ K +++ D
Sbjct: 116 WIKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPD 151
Score = 37.5 bits (83), Expect = 0.015
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 633 VGRSVDETLRLVKAFQFADKHGEVCPAGWNPDTNADTIKPNPKD--SKEYF 779
VGR++DE +R V A Q A KH P W P I P D +KE F
Sbjct: 184 VGRNMDEVVRAVDALQTAAKHAVATPVNWKPGERV-VIPPGVSDDEAKEKF 233
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 55.2 bits (127), Expect = 7e-08
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Frame = +2
Query: 86 KSLLTHAKMSFIVKQLSRSVLSPAFKVAKRINFSTTSTTRAPKVQKPAPDFSATAVVNGE 265
+S + HA +++QLS + A +VA+ + S+ + K AP+F+ + +
Sbjct: 84 RSTMMHAAAWLLLQQLSPA----AARVARAAD--DDSSVQVSK-GSAAPNFTLR---DQD 133
Query: 266 FNQLKLSDFTGKYVVLFFYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHL 445
+ LS F G+ VV++FYP D T C + AF D + F +VIG+S D SH
Sbjct: 134 GRAVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDAASHK 193
Query: 446 AWINTPRKDGGLGKMEIPLLADYKKQISKDYDVLLDDGFALRG--LFIIDRNGTL 604
+ +K K+ LL+D ++ K++ V D L G +++D+NG +
Sbjct: 194 EF---KKK----YKLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVLDKNGVV 241
>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
Length = 220
Score = 51.6 bits (118), Expect = 8e-07
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +2
Query: 272 QLKLSDFTGK-YVVLFFYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHLA 448
+++L DF G YV++F +P DFT VC TEL + A +F +++G S D SH
Sbjct: 21 KIRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKD 80
Query: 449 WINTPRKDGGLGKMEIPLLADYKKQISKDYDVL 547
WI ++ P++AD ++ + +++
Sbjct: 81 WIKDIEAYKPGRRVGFPIVADPDREAIRQLNMI 113
>09_05_0015 -
20083143-20083308,20083645-20084017,20084362-20084675,
20085164-20085512,20085678-20085837,20086307-20086618,
20086700-20086820,20087225-20087277
Length = 615
Score = 33.1 bits (72), Expect = 0.31
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +2
Query: 512 YKKQISKDYDVLLDDGFALRGLFIIDRNGTLASHVGERSARGPLRGRDAPPGQGLPVRRQ 691
Y++++ KD+ LLDD LF+I++ G +A+ + + R R +D P Q + R+
Sbjct: 43 YRRRVLKDFSKLLDDEIEKIVLFMIEQQGLIAARLEDLGKR-RARLQDIPLLQEITELRE 101
Query: 692 ARRGV 706
R V
Sbjct: 102 DYRSV 106
>12_01_0809 + 7422137-7422251,7425578-7426353
Length = 296
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -2
Query: 754 FGLMVSALVSGFQPAGHTSPCLSANWKALTRRSVSSTER 638
FG+++ L++G P H SP SA++ A + S ++T+R
Sbjct: 169 FGVVLMELLTGRGPGDHASPSTSASFSAPSSSSAATTDR 207
>03_04_0011 +
16398093-16398170,16401321-16401806,16401892-16402380,
16402810-16403466
Length = 569
Score = 31.5 bits (68), Expect = 0.96
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Frame = +2
Query: 251 VVNGEFNQLKLSDFTGKYVVLFFYPLDFTFVCP-TELIA-FSDKAKDFAGIDCQVIGVST 424
+++ + +++ +SD GKYV L F + V T L+A F +K K+ G +V+ VS
Sbjct: 181 LLSNKGDRVPISDLEGKYVGLCFVVNGYGPVVQFTSLLAKFYEKLKE-VGEKFEVVAVSL 239
Query: 425 DSE-------FSHLAWINTPRKD 472
DS+ F+ + W+ P++D
Sbjct: 240 DSDEELSNESFAGMPWLAIPQED 262
>02_01_0449 -
3229260-3229365,3230264-3230396,3230536-3230625,
3231097-3231309,3232317-3232407,3232519-3232707,
3232810-3232920,3233018-3233110
Length = 341
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Frame = +2
Query: 245 TAVVNGEFNQLK-------LSDFTGKYVVLFFYPLDFTFVCPTELIAFS---DKAKDFAG 394
TA + G FN L DF GK+ +L+F +CP EL + DK K+ A
Sbjct: 178 TAAIGGPFNLLNHDGKPVTQKDFFGKWTLLYFGFTHCPDICPDELQKMALAIDKIKEKAK 237
Query: 395 IDCQVIGVSTDSE 433
++ + ++ D E
Sbjct: 238 MEVVPVFITVDPE 250
>01_06_1608 - 38612754-38616947,38617030-38617095
Length = 1419
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 71 ELYNPKSLLTHAKMSFIVKQLSRSVLSPAFKVAKRINFSTTSTTRAPKVQK 223
E Y P L SF+ +++SRS S +V R+ FST +T A + K
Sbjct: 154 ETYEPDKLQAQ---SFLEEEISRSPYSVIVEVGPRMTFSTAFSTNAVSICK 201
>06_03_0251 +
18715023-18715106,18715274-18715396,18715509-18715611,
18716061-18716134,18716208-18716288,18716370-18716522,
18717435-18717506,18718313-18718396
Length = 257
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 86 KSLLTHAKMSFI--VKQLSRSVLSPAFKVAKRINFSTTSTTRAPKVQ-KPAPDFSATAVV 256
++ +TH K F+ QL +VLS K+ ++ + K KP D SA+ +
Sbjct: 128 EAAVTHCKGHFVNPTNQLCANVLSTIHKLMSEVSDGNILEDKCVKAAPKPTIDVSASRAL 187
Query: 257 NGEFNQL 277
E+NQL
Sbjct: 188 LEEYNQL 194
>06_01_0203 +
1555471-1555523,1555743-1555863,1556340-1556651,
1556806-1556910,1557009-1557466,1557886-1558187,
1558300-1558481,1558893-1559083,1559248-1559381,
1559487-1559725
Length = 698
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 515 KKQISKDYDVLLDDGFALRGLFIIDRNGTLASHV 616
++++ KD+ +LDD LF++++ G LAS +
Sbjct: 44 RRRVLKDFSKMLDDQIEKIVLFLLEQQGALASRI 77
>03_01_0418 -
3211687-3211933,3212016-3212164,3212443-3212551,
3212650-3212840,3212967-3213102,3213216-3213716,
3213819-3213923,3214008-3214095,3214195-3214266,
3214692-3214762,3215726-3216008,3216388-3216463
Length = 675
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 775 YSLLSLGFGLMVSALVSGFQPAGHTSPCLSAN 680
YS +S G+G S+L +PAGHT CL A+
Sbjct: 375 YSPMSYGYG-NPSSLEESHRPAGHTRYCLVAS 405
>06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849
Length = 489
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2
Query: 29 PXPLPRPWEXLKXPELYNPKSLLTHAKMSFI-VKQLSRSVLSPAFKVAKRINFSTTSTTR 205
P P P+P L E+ +S ++ K L L KR + +TTR
Sbjct: 183 PPPRPKPKHKLVLREIEPGESSEVPSETKHSEAKPLETKPLQTKVSGVKRKVDAIPATTR 242
Query: 206 APKVQKPAPDFS 241
K+QKPA D+S
Sbjct: 243 PGKLQKPAQDWS 254
>04_01_0610 -
7997406-7998047,7998379-7998426,8000719-8001143,
8002301-8002589
Length = 467
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 494 IPLLADYKKQISKDYDVLLDDGFALRGL-FIIDRNGTLASHVGERSARGPLRGRDAPPGQ 670
+P + D I ++Y + L++ F+++ G + + GE A GR APP +
Sbjct: 164 VPAVYDANADIEEEYRLFLENVRVYENDDFVVEYEGVVVRYGGEAVADHGA-GRGAPPVK 222
Query: 671 GLPVRRQARRGV 706
G+P Q V
Sbjct: 223 GVPDPNQLNGSV 234
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,437,886
Number of Sequences: 37544
Number of extensions: 467903
Number of successful extensions: 1280
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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