Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_N06
(908 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14608| Best HMM Match : AhpC-TSA (HMM E-Value=0) 200 1e-51
SB_22073| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 8e-29
SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012) 81 9e-16
SB_35139| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_58829| Best HMM Match : HC2 (HMM E-Value=5.8) 33 0.24
SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_45252| Best HMM Match : DIT1_PvcA (HMM E-Value=6.5e-07) 31 1.3
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_42549| Best HMM Match : Peptidase_A17 (HMM E-Value=1e-35) 29 3.9
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_5543| Best HMM Match : Kelch_1 (HMM E-Value=1.4e-06) 29 3.9
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 6.9
SB_43439| Best HMM Match : AhpC-TSA (HMM E-Value=9.80909e-44) 28 9.1
>SB_14608| Best HMM Match : AhpC-TSA (HMM E-Value=0)
Length = 265
Score = 200 bits (488), Expect = 1e-51
Identities = 100/164 (60%), Positives = 121/164 (73%), Gaps = 2/164 (1%)
Frame = +2
Query: 119 IVKQLSRSVLSPAFKVAKRINFSTTSTTRAPKVQKPAPDFSATAV-VNGEFNQLKLSDFT 295
+V Q R+ +PAF +AKR+ + + +QKPAP FS TAV +GEF LKLSD+
Sbjct: 22 LVLQQPRNA-APAFHLAKRMMSFSRADMSKTAIQKPAPAFSGTAVNKHGEFIDLKLSDYK 80
Query: 296 GKYVVLFFYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHLAWINTPRKDG 475
GKYVVLFFYPLDFTFVCPTE+IAFSD+ +F I+C+VI S DSE+SHLAW N PRK G
Sbjct: 81 GKYVVLFFYPLDFTFVCPTEIIAFSDRVDEFKAINCEVIACSVDSEYSHLAWTNVPRKKG 140
Query: 476 GLGKMEIPLLADYKKQISKDYDVLLDD-GFALRGLFIIDRNGTL 604
G+G + IP+L+D KQISKDY VLL+D G ALRGLFIID G L
Sbjct: 141 GIGNINIPILSDLTKQISKDYGVLLEDQGVALRGLFIIDDKGIL 184
Score = 80.6 bits (190), Expect = 2e-15
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = +3
Query: 606 RHMSVNDLPVGRSVDETLRLVKAFQFADKHGEVCPAGWNPDTNADT 743
R +++NDLPVGRSVDETLRL++AFQF DKHGEVCPAGW P ADT
Sbjct: 185 RQITINDLPVGRSVDETLRLIQAFQFTDKHGEVCPAGWRP--GADT 228
>SB_22073| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 124 bits (300), Expect = 8e-29
Identities = 53/80 (66%), Positives = 66/80 (82%)
Frame = +2
Query: 212 KVQKPAPDFSATAVVNGEFNQLKLSDFTGKYVVLFFYPLDFTFVCPTELIAFSDKAKDFA 391
++ KPAP + TAVVNGEF +LKLSDF GKY+V FFYPLDFTFVCPTE+IAFSD+ ++F
Sbjct: 55 QISKPAPFWEGTAVVNGEFKELKLSDFEGKYLVFFFYPLDFTFVCPTEIIAFSDRIEEFR 114
Query: 392 GIDCQVIGVSTDSEFSHLAW 451
I+ +V+G S DS F+HLAW
Sbjct: 115 AINTEVVGCSVDSVFTHLAW 134
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = +3
Query: 606 RHMSVNDLPVGRSVDETLRLVKAFQFADKH 695
R +++NDLPVGRSVDETLRLV+AFQ+ DKH
Sbjct: 146 RQITMNDLPVGRSVDETLRLVQAFQYTDKH 175
>SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012)
Length = 704
Score = 81.4 bits (192), Expect = 9e-16
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +3
Query: 606 RHMSVNDLPVGRSVDETLRLVKAFQFADKHGEVCPAGWNPDTNADT 743
R +++NDLPVGRSVDETLRL++AFQF DKHGEVCPAGW P + T
Sbjct: 54 RQITINDLPVGRSVDETLRLIQAFQFTDKHGEVCPAGWRPGADTGT 99
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Frame = +2
Query: 455 NTPRKDGGLGKMEIPLLADYKKQISKDYDVLLDD-GFALRGLFIIDRNGTL 604
N PRK GG+G + IP+L+D KQISKDY VLL+D G ALRGLFIID G L
Sbjct: 3 NVPRKKGGIGNINIPILSDLTKQISKDYGVLLEDQGVALRGLFIIDDKGIL 53
>SB_35139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 81.0 bits (191), Expect = 1e-15
Identities = 36/51 (70%), Positives = 41/51 (80%)
Frame = +3
Query: 633 VGRSVDETLRLVKAFQFADKHGEVCPAGWNPDTNADTIKPNPKDSKEYFQK 785
VGRSVDETLRLV+AFQ+ DKHGEVCPAGW P DTI P+P K+YF+K
Sbjct: 1 VGRSVDETLRLVQAFQYTDKHGEVCPAGWKP--GKDTIIPDPTQKKKYFEK 49
>SB_58829| Best HMM Match : HC2 (HMM E-Value=5.8)
Length = 959
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -1
Query: 638 AHGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
AH H + H+ + T LL Q HH H LLK V NQ
Sbjct: 585 AHHNQCHTALLKQLHHNQCQTTLLKQVHHNQCHTTLLKQVHHNQ 628
Score = 32.7 bits (71), Expect = 0.42
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -1
Query: 653 LVHGAAHGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
L+ A H Q H + H+ + T LL Q HH H LLK V NQ
Sbjct: 633 LLREADHNQC-HTTLLKQAHHNQCHTALLKQLHHNQCHTTLLKQVHHNQ 680
Score = 32.7 bits (71), Expect = 0.42
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -1
Query: 653 LVHGAAHGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
L+ A H Q H + H+ + T LL Q HH H LLK V NQ
Sbjct: 737 LLREADHNQC-HTTLLKQAHHNQCHTALLKQLHHNQCHTTLLKQVHHNQ 784
Score = 32.3 bits (70), Expect = 0.56
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -1
Query: 635 HGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
H H + H+ + T LL Q HH H LLK V NQ
Sbjct: 781 HHNQCHTTLLKQAHHNQCHTTLLKQAHHNKCHTTLLKQVHHNQ 823
Score = 31.9 bits (69), Expect = 0.74
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -1
Query: 638 AHGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
AH H + H+ + T LL Q HH H LLK NQ
Sbjct: 650 AHHNQCHTALLKQLHHNQCHTTLLKQVHHNQCHTTLLKQAHHNQ 693
Score = 31.9 bits (69), Expect = 0.74
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -1
Query: 638 AHGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
AH H + H+ + T L Q HH H LLK V NQ
Sbjct: 689 AHHNQCHTALLKQLHHNQCQTTLFKQVHHNQCHTTLLKQVHHNQ 732
Score = 31.9 bits (69), Expect = 0.74
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -1
Query: 638 AHGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
AH H + H+ + T LL Q HH H LLK NQ
Sbjct: 754 AHHNQCHTALLKQLHHNQCHTTLLKQVHHNQCHTTLLKQAHHNQ 797
Score = 31.9 bits (69), Expect = 0.74
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -1
Query: 638 AHGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
AH H + H+ + T LL Q HH H LLK V N+
Sbjct: 858 AHHNQCHTTLLKQLHHNQCHTTLLKQAHHNQCHTTLLKQVHHNK 901
Score = 31.5 bits (68), Expect = 0.97
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -1
Query: 638 AHGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
AH H + H+ + T LL Q HH H LLK V +Q
Sbjct: 806 AHHNKCHTTLLKQVHHNQCQTTLLKQVHHNQCHTTLLKQVHHHQ 849
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -1
Query: 638 AHGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
AH H + H+ + T LL Q HH LLK V NQ
Sbjct: 793 AHHNQCHTTLLKQAHHNKCHTTLLKQVHHNQCQTTLLKQVHHNQ 836
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = -1
Query: 668 DQAERLVHGAAHGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
+Q + + H H + H+ + T LL Q HH H LLK + NQ
Sbjct: 822 NQCQTTLLKQVHHNQCHTTLLKQVHHHQCHTTLLKQAHHNQCHTTLLKQLHHNQ 875
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -1
Query: 635 HGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
H H + H+ + T LL Q HH H LLK NQ
Sbjct: 846 HHHQCHTTLLKQAHHNQCHTTLLKQLHHNQCHTTLLKQAHHNQ 888
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -1
Query: 635 HGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
H H + H+ + T LL Q HH H LLK + NQ
Sbjct: 664 HHNQCHTTLLKQVHHNQCHTTLLKQAHHNQCHTALLKQLHHNQ 706
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -1
Query: 668 DQAERLVHGAAHGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
+Q ++ H H ++ + CH T LL Q HH H LLK + NQ
Sbjct: 554 NQPKKAHHNQCHTTLLRKADHNQCH-----TTLLKQAHHNQCHTALLKQLHHNQ 602
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -1
Query: 653 LVHGAAHGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
L+ A H Q H + H+ + T LL Q HH LLK V NQ
Sbjct: 568 LLRKADHNQC-HTTLLKQAHHNQCHTALLKQLHHNQCQTTLLKQVHHNQ 615
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -1
Query: 635 HGQIVHRHVTPGCHYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 507
H H + H+ + T LL Q HH H LLK N+
Sbjct: 768 HHNQCHTTLLKQVHHNQCHTTLLKQAHHNQCHTTLLKQAHHNK 810
>SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1074
Score = 32.7 bits (71), Expect = 0.42
Identities = 24/91 (26%), Positives = 42/91 (46%)
Frame = +2
Query: 512 YKKQISKDYDVLLDDGFALRGLFIIDRNGTLASHVGERSARGPLRGRDAPPGQGLPVRRQ 691
YK + D + LLDD + L + + ++ + E++A P +G P +Q
Sbjct: 909 YKAYLQSDDEDLLDDS---QTLSLAEAAEVVSKNQREKAATQSNTPASRLPPRGKP-SKQ 964
Query: 692 ARRGVPGRLEPGHQRRHHQAEPQGQ*RILSK 784
AR P +P + +H Q+ PQG + S+
Sbjct: 965 ARPNQPKASKPSKKAKHDQSIPQGSLSLSSR 995
>SB_45252| Best HMM Match : DIT1_PvcA (HMM E-Value=6.5e-07)
Length = 211
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 128 QLSRSVLSPAFKVAKRIN-FSTTSTTRAPKVQKPAPDFSATAVVNGEFNQLKLSDFTGK 301
QL++SVLS + + I TT PK +P + ATA++ + + L F GK
Sbjct: 17 QLAQSVLSKVMQFRRMIEECQDNCTTECPKCHRPHENKVATAIMQNKKIRFVLPGFPGK 75
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 620 ERSARGPLRGRDAPPGQGLPVRRQARRGVPG 712
+R P RGRDAPPG+G + RG PG
Sbjct: 794 DRDRGPPGRGRDAPPGRGQGYTNRG-RGQPG 823
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 611 HVGERSARGPLRGRDAPPGQGLPVRRQARRGVPGRLEPGHQRRHHQAEPQG 763
H ER P RGRD P + + R + G P R P Q R +P+G
Sbjct: 599 HRDERPEEFPRRGRDEP--EFVRPRGRDDGGRPSREPPRDQHRRPYDDPEG 647
>SB_42549| Best HMM Match : Peptidase_A17 (HMM E-Value=1e-35)
Length = 1595
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/76 (23%), Positives = 31/76 (40%)
Frame = +2
Query: 425 DSEFSHLAWINTPRKDGGLGKMEIPLLADYKKQISKDYDVLLDDGFALRGLFIIDRNGTL 604
D E ++ + P++DG I ++ + + DY + G+A R
Sbjct: 661 DPETGWISCVTLPKRDGNSFSTNIFKISHPRSEYKNDYVAFIQKGYAERAPTYSAEKSFY 720
Query: 605 ASHVGERSARGPLRGR 652
SH G ++R P R R
Sbjct: 721 ISHHGVYNSRKPGRIR 736
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +2
Query: 638 PLRGRDAPPGQGLPVRRQARRGVPGRLEPGHQRR 739
P+RGR AP G+G P R RG P PG RR
Sbjct: 83 PMRGRGAPYGRGGPPSRGPPRGPP---LPGPPRR 113
>SB_5543| Best HMM Match : Kelch_1 (HMM E-Value=1.4e-06)
Length = 260
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -2
Query: 466 PRSVDPCEMTELRVCGHSNHLTIDSSKVFSFITERYELCRTYKC 335
P DPCE T GHS + D+ +F ++ C T C
Sbjct: 11 PSEEDPCECTPYMRYGHSASIVDDTVYIFGGRSDVQGACNTLYC 54
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/69 (27%), Positives = 27/69 (39%)
Frame = +2
Query: 26 SPXPLPRPWEXLKXPELYNPKSLLTHAKMSFIVKQLSRSVLSPAFKVAKRINFSTTSTTR 205
S PLPR + + P S + K SRS SP + N S R
Sbjct: 506 STSPLPRQTRRVSPTQAVRPSSTQGQSAPVGRTKSPSRSYTSPRQRRTSPNNRSPPPRRR 565
Query: 206 APKVQKPAP 232
+P ++P+P
Sbjct: 566 SPSPRRPSP 574
>SB_43439| Best HMM Match : AhpC-TSA (HMM E-Value=9.80909e-44)
Length = 246
Score = 28.3 bits (60), Expect = 9.1
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 290 FTGKYVVLFFYPLDFTFVC-PTELIAFSDKAKDF--AGIDCQVIGVSTDSEFSHLAW 451
F GK VVLF P FT C T L +++ A F G+D +I +S + F +W
Sbjct: 32 FAGKTVVLFALPGAFTPTCSSTHLPRYNELAPVFKAQGVD-DIICLSVNDTFVMNSW 87
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,073,322
Number of Sequences: 59808
Number of extensions: 541053
Number of successful extensions: 1616
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1601
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2621784220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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