Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_N06
         (908 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-depend...    83   1e-17
AY800250-1|AAV68043.1|   97|Anopheles gambiae thioredoxin depend...    29   0.26 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.79 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.4  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    25   2.4  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    25   3.2  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   4.2  

>AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-dependent
           peroxidase protein.
          Length = 96

 Score = 83.0 bits (196), Expect = 1e-17
 Identities = 39/54 (72%), Positives = 43/54 (79%)
 Frame = +2

Query: 443 LAWINTPRKDGGLGKMEIPLLADYKKQISKDYDVLLDDGFALRGLFIIDRNGTL 604
           LAWINTPRK GGLGK+E PLLAD  K+IS DY VLL DG +LRGLFIID  G +
Sbjct: 1   LAWINTPRKAGGLGKLEYPLLADLTKRISADYGVLLPDGISLRGLFIIDPAGVV 54



 Score = 77.4 bits (182), Expect = 6e-16
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = +3

Query: 606 RHMSVNDLPVGRSVDETLRLVKAFQFADKHGEVCPAGWNP 725
           R +++NDLPVGRSVDETLRL+KAFQF +KHGEVCPA W P
Sbjct: 55  RQITINDLPVGRSVDETLRLIKAFQFVEKHGEVCPANWEP 94


>AY800250-1|AAV68043.1|   97|Anopheles gambiae thioredoxin dependent
           peroxidase protein.
          Length = 97

 Score = 28.7 bits (61), Expect = 0.26
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 636 GRSVDETLRLVKAFQFADKHGEVCPAGWNP 725
           GR+  E LR + + Q  DK     PA W P
Sbjct: 26  GRNFAEILRTIDSMQLTDKRRVATPADWMP 55


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 27.1 bits (57), Expect = 0.79
 Identities = 17/39 (43%), Positives = 18/39 (46%)
 Frame = +2

Query: 617 GERSARGPLRGRDAPPGQGLPVRRQARRGVPGRLEPGHQ 733
           GE    G LRG D  PG   P   +   GVPG   PG Q
Sbjct: 317 GEPGVPG-LRGNDGIPGLEGPSGPKGDAGVPGYGRPGPQ 354



 Score = 23.4 bits (48), Expect = 9.7
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 602 LASHVGERSARGPLRGRDAPPGQGLP 679
           L  H GE+   GP+    AP   G+P
Sbjct: 58  LTGHRGEKGNSGPVGPPGAPGRDGMP 83


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 659 PPGQGLPVRRQARRG-VPGRLEPGHQRRHHQAE 754
           PPG  +P+R Q   G VPG ++PG Q R   A+
Sbjct: 221 PPGVPMPMRPQMPPGAVPG-MQPGMQPRPPSAQ 252


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +2

Query: 422 TDSEFSHLAWINTPRKDGGLGKMEIPLLADYKKQISKDYDVLLDDGFALRGLFIIDRNGT 601
           T   + H    N P   GG+  +  PLL  +  ++ K   V     F  RG++  +R+  
Sbjct: 57  TQRHYDHFKRQNVPY--GGVFMLTSPLLYIFDTKLIKQLLVKDFHHFPNRGVYFNERDDP 114

Query: 602 LASHV 616
           L++H+
Sbjct: 115 LSAHM 119


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +3

Query: 198 LQELLKFRSLLQTSVRQQLSMESSINLNFQISRENT*FCSSIHWISHLYVR 350
           L  ++  R+L    +   LS+ +S      +SR N    S  HWI H   R
Sbjct: 210 LVRIVPRRNLFDHLLPDNLSLFASFVTQHYVSRRNRIIPSLEHWIPHCGAR 260


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +1

Query: 214 SSEACSRLQCDSSCQWRVQST*TFRFHGKIRSSVLLSIG--FHICM 345
           SS + SRL      +W VQ+   F+  G   SS    +G  F +C+
Sbjct: 130 SSASDSRLTLSQIYEWMVQNVPYFKDKGDSNSSAGWKVGGSFFVCV 175


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 873,828
Number of Sequences: 2352
Number of extensions: 17980
Number of successful extensions: 45
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)