Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_N06
         (908 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin ...   181   7e-46
Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical pr...   164   7e-41
AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical...    45   7e-05
Z70035-4|CAA93864.2|  410|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    29   4.6  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    29   4.6  
Z49069-2|CAA88865.1|  333|Caenorhabditis elegans Hypothetical pr...    29   4.6  
U88165-8|AAK21391.1|  581|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin
           protein 2 protein.
          Length = 195

 Score =  181 bits (440), Expect = 7e-46
 Identities = 86/131 (65%), Positives = 101/131 (77%), Gaps = 1/131 (0%)
 Frame = +2

Query: 215 VQKPAPDFSATAVVNGEFNQLKLSDFTGKYVVLFFYPLDFTFVCPTELIAFSDKAKDFAG 394
           + KPAP F   AVV+GEF  + LSD+ GKYVVLFFYPLDFTFVCPTE+IAFSD+A++F  
Sbjct: 6   IGKPAPQFKTQAVVDGEFVDVSLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRAEEFKA 65

Query: 395 IDCQVIGVSTDSEFSHLAWINTPRKDGGLGKMEIPLLADYKKQISKDYDVLL-DDGFALR 571
           I+  V+  STDS FSHLAWIN PRK GGLG+M IP+LAD   QIS+DY VL  D+G A R
Sbjct: 66  INTVVLAASTDSVFSHLAWINQPRKHGGLGEMNIPVLADTNHQISRDYGVLKEDEGIAFR 125

Query: 572 GLFIIDRNGTL 604
           GLFIID +  L
Sbjct: 126 GLFIIDPSQNL 136



 Score = 98.3 bits (234), Expect = 7e-21
 Identities = 43/60 (71%), Positives = 52/60 (86%)
 Frame = +3

Query: 606 RHMSVNDLPVGRSVDETLRLVKAFQFADKHGEVCPAGWNPDTNADTIKPNPKDSKEYFQK 785
           R +++NDLPVGRSVDETLRLV+AFQF +KHGEVCPAGW P   +DTIKP  K+S+EYF+K
Sbjct: 137 RQITINDLPVGRSVDETLRLVQAFQFVEKHGEVCPAGWTP--GSDTIKPGVKESQEYFKK 194


>Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical
           protein R07E5.2 protein.
          Length = 226

 Score =  164 bits (399), Expect = 7e-41
 Identities = 80/165 (48%), Positives = 110/165 (66%), Gaps = 1/165 (0%)
 Frame = +2

Query: 113 SFIVKQLSRSVLSPAFKVAKRINFSTTSTTRAPKVQKPAPDFSATAVVNGEFNQLKLSDF 292
           S  V+ L R+V + A +         +     PK   PA  F  TAVV+G+F  +   D+
Sbjct: 3   SSAVRALCRTVPTVATRQLSTSRALLSLRPLGPKNTVPA--FKGTAVVDGDFKVISDQDY 60

Query: 293 TGKYVVLFFYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHLAWINTPRKD 472
            GK++V+FFYPLDFTFVCPTE+IA+ D+A +F  +  +V+  S DS FSHLAW+NTPRKD
Sbjct: 61  KGKWLVMFFYPLDFTFVCPTEIIAYGDRANEFRSLGAEVVACSCDSHFSHLAWVNTPRKD 120

Query: 473 GGLGKMEIPLLADYKKQISKDYDVL-LDDGFALRGLFIIDRNGTL 604
           GGLG M+IPLLAD+ K+I+  + VL  + G + RGLF+ID +GT+
Sbjct: 121 GGLGDMDIPLLADFNKKIADSFGVLDKESGLSYRGLFLIDPSGTV 165



 Score = 94.3 bits (224), Expect = 1e-19
 Identities = 43/62 (69%), Positives = 49/62 (79%)
 Frame = +3

Query: 606 RHMSVNDLPVGRSVDETLRLVKAFQFADKHGEVCPAGWNPDTNADTIKPNPKDSKEYFQK 785
           RH + NDLPVGRSVDETLR++KAFQF+DKHGEVCPA W+ D  + TIKP    SKEYF K
Sbjct: 166 RHTTCNDLPVGRSVDETLRVLKAFQFSDKHGEVCPADWHED--SPTIKPGVATSKEYFNK 223

Query: 786 AN 791
            N
Sbjct: 224 VN 225


>AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.11 protein.
          Length = 231

 Score = 45.2 bits (102), Expect = 7e-05
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
 Frame = +2

Query: 281 LSDFTGK-YVVLFFYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHLAW-- 451
           L ++ G+ +++LF +P DFT VC TEL      A +F     Q++ +S DS  +H  W  
Sbjct: 22  LHNYIGEQWLMLFSHPADFTPVCTTELAELVKLAPEFRKRHVQILAISIDSSETHRDWAK 81

Query: 452 -INTPRKDGGLGK-MEIPLLADYKKQISKDYDVLLDDGFALRGLFIIDR 592
            IN+  +    G  +   ++AD  + I  +  ++  D     G+ +  R
Sbjct: 82  DINSVAQLSNCGSHLPFEIIADTDRSICTELGMIDPDEMNSEGICLSAR 130


>Z70035-4|CAA93864.2|  410|Caenorhabditis elegans Hypothetical
           protein R09D1.4 protein.
          Length = 410

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 19/68 (27%), Positives = 33/68 (48%)
 Frame = +2

Query: 92  LLTHAKMSFIVKQLSRSVLSPAFKVAKRINFSTTSTTRAPKVQKPAPDFSATAVVNGEFN 271
           + T +  S   K+L+ + ++PA         S TSTT++PK+    P F    +V G F 
Sbjct: 45  IATGSASSTRFKKLTTTTINPATSATTGNTSSATSTTKSPKIATKTP-FCKKRIV-GFFT 102

Query: 272 QLKLSDFT 295
             + ++ T
Sbjct: 103 DTQSTEIT 110


>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -2

Query: 445  EMTELRVCGHSNHLTIDSSKVFSFITERYELC-RTYKCEIQWIEEQNYVFSREI*KFKLI 269
            E+ +L   G    + +D   +     +  ++C + ++  I++ EEQ Y+F  E    KL+
Sbjct: 1084 EIRKLEEAGDDQSIAVDPCPIPIENGQIVDMCEKCFEQHIKFTEEQKYMFENENIYVKLV 1143

Query: 268  ELSID 254
             L+++
Sbjct: 1144 NLNVE 1148


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -2

Query: 445  EMTELRVCGHSNHLTIDSSKVFSFITERYELC-RTYKCEIQWIEEQNYVFSREI*KFKLI 269
            E+ +L   G    + +D   +     +  ++C + ++  I++ EEQ Y+F  E    KL+
Sbjct: 1084 EIRKLEEAGDDQSIAVDPCPIPIENGQIVDMCEKCFEQHIKFTEEQKYMFENENIYVKLV 1143

Query: 268  ELSID 254
             L+++
Sbjct: 1144 NLNVE 1148


>Z49069-2|CAA88865.1|  333|Caenorhabditis elegans Hypothetical
           protein K12D12.3 protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 19/52 (36%), Positives = 23/52 (44%)
 Frame = +2

Query: 611 HVGERSARGPLRGRDAPPGQGLPVRRQARRGVPGRLEPGHQRRHHQAEPQGQ 766
           H GE  A GP +G+  P G      RQ  +G  GR   G      Q  PQG+
Sbjct: 209 HPGEMGAPGP-QGKQGPDG------RQGEKGADGRKPIGRPGPKGQRGPQGE 253


>U88165-8|AAK21391.1|  581|Caenorhabditis elegans Hypothetical
           protein F54C1.1 protein.
          Length = 581

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 410 IGVSTDSEFSHLAWINTPRKDGGLGKMEIP 499
           +G   D   +++ WI T   D G G+M+IP
Sbjct: 37  VGEQLDENGNNITWIQTYLYDFGFGEMQIP 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,214,846
Number of Sequences: 27780
Number of extensions: 414498
Number of successful extensions: 1168
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)