Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_N06
(908 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)... 168 4e-42
At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putat... 167 9e-42
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 61 9e-10
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 55 6e-08
At3g08950.1 68416.m01045 electron transport SCO1/SenC family pro... 35 0.086
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 32 0.60
At5g45170.1 68418.m05545 CbbY protein-related low similarity to ... 31 1.1
At5g02180.1 68418.m00139 amino acid transporter family protein b... 29 3.2
At1g50830.1 68414.m05716 hypothetical protein 28 7.4
At5g52470.1 68418.m06510 fibrillarin 1 (FBR1) (FIB1) (SKIP7) ide... 28 9.8
At5g07870.1 68418.m00906 transferase family protein similar to a... 28 9.8
At1g58227.1 68414.m06616 hypothetical protein 28 9.8
>At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)
identical to SP|Q96291 2-cys peroxiredoxin BAS1,
chloroplast precursor {Arabidopsis thaliana}; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 266
Score = 168 bits (409), Expect = 4e-42
Identities = 93/190 (48%), Positives = 125/190 (65%), Gaps = 13/190 (6%)
Frame = +2
Query: 74 LYNPKSLLTHAKMSFIVKQLSRSVLSPAFK--VAKRINFSTTS----TTRA-----PKVQ 220
++ KS L+ +SF+ + LS S + + A+R + S+TS +A P V
Sbjct: 18 VFPAKSSLSSPSVSFL-RTLSSPSASASLRSGFARRSSLSSTSRRSFAVKAQADDLPLVG 76
Query: 221 KPAPDFSATAVVNGEFNQLKLSDFTGK-YVVLFFYPLDFTFVCPTELIAFSDKAKDFAGI 397
APDF A AV + EF ++KLSD+ GK YV+LFFYPLDFTFVCPTE+ AFSD+ +F +
Sbjct: 77 NKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKL 136
Query: 398 DCQVIGVSTDSEFSHLAWINTPRKDGGLGKMEIPLLADYKKQISKDYDVLL-DDGFALRG 574
+ +V+GVS DS FSHLAW+ T RK GGLG + PL++D K ISK + VL+ D G ALRG
Sbjct: 137 NTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQGIALRG 196
Query: 575 LFIIDRNGTL 604
LFIID+ G +
Sbjct: 197 LFIIDKEGVI 206
Score = 66.9 bits (156), Expect = 2e-11
Identities = 30/59 (50%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = +3
Query: 606 RHMSVNDLPVGRSVDETLRLVKAFQFADKH-GEVCPAGWNPDTNADTIKPNPKDSKEYF 779
+H ++N+L +GRSVDET+R ++A Q+ ++ EVCPAGW P ++KP+PK SKEYF
Sbjct: 207 QHSTINNLGIGRSVDETMRTLQALQYIQENPDEVCPAGWKP--GEKSMKPDPKLSKEYF 263
>At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putative
very strong similarity to SP|Q96291 2-cys peroxiredoxin
BAS1, chloroplast precursor {Arabidopsis thaliana};
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 273
Score = 167 bits (406), Expect = 9e-42
Identities = 82/149 (55%), Positives = 106/149 (71%), Gaps = 3/149 (2%)
Frame = +2
Query: 167 AKRINFSTTSTTR-APKVQKPAPDFSATAVVNGEFNQLKLSDFTGK-YVVLFFYPLDFTF 340
A R NF+ + P V APDF A AV + EF ++KLS++ GK YV+LFFYPLDFTF
Sbjct: 65 ASRRNFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTF 124
Query: 341 VCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHLAWINTPRKDGGLGKMEIPLLADYKK 520
VCPTE+ AFSD+ ++F ++ +V+GVS DS FSHLAW+ T RK GGLG + PL++D K
Sbjct: 125 VCPTEITAFSDRYEEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITK 184
Query: 521 QISKDYDVLL-DDGFALRGLFIIDRNGTL 604
ISK + VL+ D G ALRGLFIID+ G +
Sbjct: 185 SISKSFGVLIPDQGIALRGLFIIDKEGVI 213
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/59 (50%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = +3
Query: 606 RHMSVNDLPVGRSVDETLRLVKAFQFADKH-GEVCPAGWNPDTNADTIKPNPKDSKEYF 779
+H ++N+L +GRSVDET+R ++A Q+ ++ EVCPAGW P ++KP+PK SKEYF
Sbjct: 214 QHSTINNLGIGRSVDETMRTLQALQYVQENPDEVCPAGWKP--GEKSMKPDPKLSKEYF 270
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 61.3 bits (142), Expect = 9e-10
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 7/180 (3%)
Frame = +2
Query: 86 KSLLTHAKMSFIVKQLSRSVLSPAFKVAKRINFSTTSTTRA---PKVQK--PAPDFSATA 250
K+L+T + S K + + I+ ++S+ + KV K APDF+
Sbjct: 23 KTLVTKTQFSVPTKSSESNFFGSTLTHSSYISPVSSSSLKGLIFAKVNKGQAAPDFTLKD 82
Query: 251 VVNGEFNQLKLSDFTGKYVVLFFYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDS 430
NG+ + L + GK VVL+FYP D T C + AF D + F +VIG+S D
Sbjct: 83 Q-NGK--PVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDD 139
Query: 431 EFSHLAWINTPRKDGGLGKMEIPLLADYKKQISKDYDVLLDDGFALRG--LFIIDRNGTL 604
SH A+ + K+ LL+D ++ KD+ V D AL G +++D+NG +
Sbjct: 140 SASHKAFASK-------YKLPYTLLSDEGNKVRKDWGVPGDLFGALPGRQTYVLDKNGVV 192
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 55.2 bits (127), Expect = 6e-08
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +2
Query: 269 NQLKLSD-FTGKYVVLFFYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHL 445
++ KL D F + VLF +P DFT VC TEL A + A +F +++G+S D SH
Sbjct: 20 DKFKLHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHK 79
Query: 446 AWINTPRKDGGLGKMEIPLLADYKKQI 526
WI K+ P++AD K+I
Sbjct: 80 DWIKDIEAFNHGSKVNYPIIADPNKEI 106
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 636 GRSVDETLRLVKAFQFADKHGE--VCPAGWNPD 728
GR++DE LR + + A KH P W PD
Sbjct: 144 GRNMDEVLRALDSLLMASKHNNKIATPVNWKPD 176
>At3g08950.1 68416.m01045 electron transport SCO1/SenC family
protein similar to SP|P23833 SCO1 protein, mitochondrial
precursor {Saccharomyces cerevisiae}; contains Pfam
profile PF02630: SCO1/SenC
Length = 334
Score = 34.7 bits (76), Expect = 0.086
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +2
Query: 176 INFSTTSTTRAPKVQKPAPDFSATAVVNGEFNQLKLSDFTGKYVVLFFYPLDFTFVCPTE 355
IN ++ + P K A +++ + ++ + GK+ +L+F +CP E
Sbjct: 155 INKNSIAVKEGPSAGKAAIG-GPFSLIRDDGKRVTEKNLMGKWTILYFGFTHCPDICPDE 213
Query: 356 LI---AFSDKAKDFAGIDCQVIGVSTDSE 433
LI A DK K+ +G+D + +S D E
Sbjct: 214 LIKLAAAIDKIKENSGVDVVPVFISVDPE 242
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 31.9 bits (69), Expect = 0.60
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +2
Query: 254 VNGEFNQLKLSD-FTGKYVVLFFYPLDFTFVCPTELI----AFSDKAKDFAGIDCQVIGV 418
V+ +F+ LSD F GK VV+F P +T VC + + + DK K GID VI V
Sbjct: 58 VSSKFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFK-AKGID-SVICV 115
Query: 419 STDSEFSHLAW 451
S + F+ W
Sbjct: 116 SVNDPFAINGW 126
>At5g45170.1 68418.m05545 CbbY protein-related low similarity to
SP|P40119 CbbY protein, chromosomal {Alcaligenes
eutrophus}
Length = 372
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 253 NCCRTEVWSRLLNFRSSCSAGRRKINPFCYFESRRQ 146
+C +T ++++ L+ RSS GRR PF F + Q
Sbjct: 15 SCTKTSIFTQYLSERSSHDTGRRNFLPFSNFPGKSQ 50
>At5g02180.1 68418.m00139 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 550
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 95 LTHAKMSFIVKQLSRSVLSPAFKVAKRINF--STTSTTRAPKVQKPAPDFSATAVVNGEF 268
+T +SF+ + SR + S +F+ ++ +F S +S++ P + +P PD T +
Sbjct: 83 MTPPSVSFMPQSSSRRLAS-SFQKKQQSSFCDSLSSSSSKPLLSQPVPDKEETILPVNPQ 141
Query: 269 NQLKLS 286
+QLKLS
Sbjct: 142 SQLKLS 147
>At1g50830.1 68414.m05716 hypothetical protein
Length = 768
Score = 28.3 bits (60), Expect = 7.4
Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 5/110 (4%)
Frame = +2
Query: 164 VAKRINFSTTSTTRAPKV-----QKPAPDFSATAVVNGEFNQLKLSDFTGKYVVLFFYPL 328
+ + I ST S T+ P + +K P+ + GE + L D V+L F L
Sbjct: 102 IFEAIKVSTYSITKNPSLILSVSEKWCPETKSFVFPWGEAT-ITLEDVM---VLLGFSVL 157
Query: 329 DFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHLAWINTPRKDGG 478
P E D K + Q + STD S +W++T GG
Sbjct: 158 GSPVFAPLETSETRDSVKKLENVRIQHMNSSTDRRVSQKSWVSTFLGRGG 207
>At5g52470.1 68418.m06510 fibrillarin 1 (FBR1) (FIB1) (SKIP7)
identical to fibrillarin 1 GI:9965653 from [Arabidopsis
thaliana]; C-terminus identical to SKP1 interacting
partner 7 GI:10716959 from [Arabidopsis thaliana];
contains Pfam domain PF01269: Fibrillarin
Length = 308
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 617 GERSARGPL-RGRDAPPGQGLPVRRQARRGVPGRLEP 724
G+R GP RGR AP G+G P R + G +EP
Sbjct: 37 GDRGRSGPRGRGRGAPRGRGGPPRGGMKGGSKVIVEP 73
>At5g07870.1 68418.m00906 transferase family protein similar to
anthranilate N-hydroxycinnamoyl/benzoyltransferase,
Dianthus caryophyllus [gi:2239091]; contains Pfam
transferase family domain PF002458
Length = 464
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +3
Query: 168 QKGLIFLRPALQELLKFRSLLQTSVRQ 248
QKGL+FL+P+ E +K + ++T +++
Sbjct: 45 QKGLLFLKPSFSESVKPKEFMETLLQK 71
>At1g58227.1 68414.m06616 hypothetical protein
Length = 1323
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/92 (20%), Positives = 38/92 (41%)
Frame = +2
Query: 311 LFFYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHLAWINTPRKDGGLGKM 490
+F + +F C L + +D + V EF AW+ M
Sbjct: 1100 IFVFIFEFLSGCKDGLARMKIISDILDLLDSNPMNVEALMEFGWSAWLTA--------SM 1151
Query: 491 EIPLLADYKKQISKDYDVLLDDGFALRGLFII 586
++ ++ DY+ ++ D+ L++ +RGLF +
Sbjct: 1152 KLDVIKDYRSELLNHDDLALNEQHFVRGLFCV 1183
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,970,272
Number of Sequences: 28952
Number of extensions: 370289
Number of successful extensions: 988
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2149324008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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