Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_N05
         (882 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    28   0.11 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    28   0.11 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    28   0.11 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    28   0.11 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   1.0  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   1.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   4.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   7.3  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   9.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 372 VPDLLHVIPVGDDTVLD 322
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 372 VPDLLHVIPVGDDTVLD 322
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 372 VPDLLHVIPVGDDTVLD 322
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 372 VPDLLHVIPVGDDTVLD 322
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 334 IITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 429
           ++T+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 130 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRXVMVGM 252
           R+  T+ P   RP+ PAT    P      +A   R +M G+
Sbjct: 28  RVLPTVEPGYLRPLIPATAPQKPDKWEDVMADIERVIMPGV 68


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 634 HPPXWTW 654
           HPP WTW
Sbjct: 52  HPPQWTW 58


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +3

Query: 120 DVAALVVDNGSGMCKAGFAGDDAPRAV-FPSIVGRPRHQGRDGRYGPERL 266
           D+   VVD G  M K          AV FP ++ + +   R G YGP+ +
Sbjct: 233 DLIRKVVD-GMAMAKLNVLHLHLTDAVSFPIVLPKVQELARFGAYGPDMI 281


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 578 EMVSPTPYPSTKVTLWPTS 634
           E+V P P P  +VT  P+S
Sbjct: 388 EIVEPVPQPVEEVTQKPSS 406


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/49 (20%), Positives = 24/49 (48%)
 Frame = +3

Query: 66  VNTSVPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI 212
           ++ ++ T  +  F   +DD + L++DN + +   G     A +   P++
Sbjct: 45  IDANLCTHVNYAFLGLNDDGSLLILDNATDITNGGLQKVAALKKTNPAL 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,193
Number of Sequences: 336
Number of extensions: 3419
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)