Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_N05
(882 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 275 3e-74
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 275 3e-74
SB_56| Best HMM Match : Actin (HMM E-Value=0) 275 3e-74
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 275 3e-74
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 266 2e-71
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 8e-38
SB_54| Best HMM Match : Actin (HMM E-Value=0) 140 1e-33
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 127 1e-29
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 100 1e-21
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 95 7e-20
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 4e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 4e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 47 2e-05
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 42 7e-04
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 40 0.003
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.004
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 36 0.057
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.71
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 31 0.93
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 2.2
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 29 5.0
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 6.6
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 29 6.6
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 8.7
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 28 8.7
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 275 bits (675), Expect = 3e-74
Identities = 126/131 (96%), Positives = 129/131 (98%)
Frame = +1
Query: 238 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 417
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 418 VLLTEAPLNPKXNREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 597
VLLTEAPLNPK NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT 163
Query: 598 VPIYEGYALAH 630
VPIYEGYAL H
Sbjct: 164 VPIYEGYALPH 174
Score = 90.2 bits (214), Expect = 2e-18
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +3
Query: 108 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 236
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 65.3 bits (152), Expect = 6e-11
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = +2
Query: 740 VRDIKEKLCYVALXFXQEMXXXXXXXXLXKSYEXPDGQVITIGXKR 877
VRDIKEKLCYVAL F QEM L KSYE PDGQVITIG +R
Sbjct: 210 VRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNER 255
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +3
Query: 648 DLAGRXLTDYLMKILTEXGXSFTTT 722
DLAGR LTDYLMKILTE G SFTTT
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTT 204
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 275 bits (675), Expect = 3e-74
Identities = 126/131 (96%), Positives = 129/131 (98%)
Frame = +1
Query: 238 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 417
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 102
Query: 418 VLLTEAPLNPKXNREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 597
VLLTEAPLNPK NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT
Sbjct: 103 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT 162
Query: 598 VPIYEGYALAH 630
VPIYEGYAL H
Sbjct: 163 VPIYEGYALPH 173
Score = 90.2 bits (214), Expect = 2e-18
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3
Query: 114 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 236
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 61.7 bits (143), Expect = 8e-10
Identities = 31/46 (67%), Positives = 32/46 (69%)
Frame = +2
Query: 740 VRDIKEKLCYVALXFXQEMXXXXXXXXLXKSYEXPDGQVITIGXKR 877
VRDIKEKL YVAL F QEM L KSYE PDGQVITIG +R
Sbjct: 209 VRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNER 254
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +3
Query: 648 DLAGRXLTDYLMKILTEXGXSFTTT 722
DLAGR LTDYLMKILTE G SFTTT
Sbjct: 179 DLAGRDLTDYLMKILTERGYSFTTT 203
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 275 bits (675), Expect = 3e-74
Identities = 126/131 (96%), Positives = 129/131 (98%)
Frame = +1
Query: 238 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 417
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 102
Query: 418 VLLTEAPLNPKXNREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 597
VLLTEAPLNPK NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT
Sbjct: 103 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT 162
Query: 598 VPIYEGYALAH 630
VPIYEGYAL H
Sbjct: 163 VPIYEGYALPH 173
Score = 88.6 bits (210), Expect = 6e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3
Query: 114 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 236
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 65.3 bits (152), Expect = 6e-11
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = +2
Query: 740 VRDIKEKLCYVALXFXQEMXXXXXXXXLXKSYEXPDGQVITIGXKR 877
VRDIKEKLCYVAL F QEM L KSYE PDGQVITIG +R
Sbjct: 209 VRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNER 254
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +3
Query: 648 DLAGRXLTDYLMKILTEXGXSFTTT 722
DLAGR LTDYLMKILTE G SFTTT
Sbjct: 179 DLAGRDLTDYLMKILTERGYSFTTT 203
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 275 bits (675), Expect = 3e-74
Identities = 126/131 (96%), Positives = 129/131 (98%)
Frame = +1
Query: 238 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 417
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 418 VLLTEAPLNPKXNREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 597
VLLTEAPLNPK NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT 163
Query: 598 VPIYEGYALAH 630
VPIYEGYAL H
Sbjct: 164 VPIYEGYALPH 174
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +3
Query: 108 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 236
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 65.3 bits (152), Expect = 6e-11
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = +2
Query: 740 VRDIKEKLCYVALXFXQEMXXXXXXXXLXKSYEXPDGQVITIGXKR 877
VRDIKEKLCYVAL F QEM L KSYE PDGQVITIG +R
Sbjct: 210 VRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNER 255
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +3
Query: 648 DLAGRXLTDYLMKILTEXGXSFTTT 722
DLAGR LTDYLMKILTE G SFTTT
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTT 204
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 266 bits (651), Expect = 2e-71
Identities = 124/130 (95%), Positives = 127/130 (97%), Gaps = 2/130 (1%)
Frame = +1
Query: 238 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 417
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 418 VLLTEAPLNPKXNREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 597
VLLTEAPLNPK NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHT 163
Query: 598 VPIYE--GYA 621
VPIYE GY+
Sbjct: 164 VPIYEERGYS 173
Score = 93.1 bits (221), Expect = 3e-19
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +3
Query: 108 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 236
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/46 (67%), Positives = 33/46 (71%)
Frame = +2
Query: 740 VRDIKEKLCYVALXFXQEMXXXXXXXXLXKSYEXPDGQVITIGXKR 877
VRDIKEKLCYVAL F QEM + KSYE PDGQVITIG +R
Sbjct: 183 VRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNER 228
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 154 bits (374), Expect = 8e-38
Identities = 67/126 (53%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Frame = +1
Query: 259 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 435
KD VGDEA R +L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 436 PLNPKXNREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 615
PLNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG
Sbjct: 113 PLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEG 172
Query: 616 YALAHV 633
+AL H+
Sbjct: 173 FALPHL 178
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 126 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 224
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 716 HHRXXXXXVRDIKEKLCYVALXFXQEMXXXXXXXXLXKSYEXPDGQVITIGXKR 877
+H VR +KEKLCYV QE L + Y PDG+V+ + +R
Sbjct: 205 NHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGER 258
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 140 bits (340), Expect = 1e-33
Identities = 63/90 (70%), Positives = 75/90 (83%)
Frame = +1
Query: 361 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKXNREKMTQIMFETFNSPAMYVAIQAVLSLY 540
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 541 ASGRTTGIVLDSGDGVSHTVPIYEGYALAH 630
ASGRTTG V D GDGVSHTVP+Y+GY L H
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPH 2218
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 132 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 233
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2
Query: 740 VRDIKEKLCYVALXFXQEMXXXXXXXXLXKSYEXPDGQVITIGXKR 877
+RD+KE LCY A+ + +E+ Y PDGQ I IG +R
Sbjct: 2254 IRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSER 2299
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 127 bits (306), Expect = 1e-29
Identities = 53/74 (71%), Positives = 68/74 (91%)
Frame = +1
Query: 409 EHPVLLTEAPLNPKXNREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 588
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 589 SHTVPIYEGYALAH 630
SH+VPIYEG+A+ H
Sbjct: 186 SHSVPIYEGFAMPH 199
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 109 bits (263), Expect = 2e-24
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = +1
Query: 454 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALAH 630
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYAL H
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPH 136
Score = 98.7 bits (235), Expect = 5e-21
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +1
Query: 238 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 381
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 91.5 bits (217), Expect = 8e-19
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3
Query: 114 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 236
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 65.3 bits (152), Expect = 6e-11
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = +2
Query: 740 VRDIKEKLCYVALXFXQEMXXXXXXXXLXKSYEXPDGQVITIGXKR 877
VRDIKEKLCYVAL F QEM L KSYE PDGQVITIG +R
Sbjct: 172 VRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNER 217
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +3
Query: 648 DLAGRXLTDYLMKILTEXGXSFTTT 722
DLAGR LTDYLMKILTE G SFTTT
Sbjct: 142 DLAGRDLTDYLMKILTERGYSFTTT 166
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 100 bits (240), Expect = 1e-21
Identities = 46/52 (88%), Positives = 48/52 (92%)
Frame = +1
Query: 475 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALAH 630
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYAL H
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPH 52
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +3
Query: 648 DLAGRXLTDYLMKILTEXGXSFTTT 722
DLAGR LTDYLMK++TE G SFTTT
Sbjct: 58 DLAGRDLTDYLMKLMTERGYSFTTT 82
Score = 36.7 bits (81), Expect = 0.025
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2
Query: 740 VRDIKEKLCYVALXFXQEM 796
VRDIKEKLCYVAL F QE+
Sbjct: 88 VRDIKEKLCYVALDFYQEI 106
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 95.1 bits (226), Expect = 7e-20
Identities = 40/102 (39%), Positives = 68/102 (66%)
Frame = +1
Query: 319 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKXNREKMTQIMFETFNS 498
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 499 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 624
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVL 104
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 4e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +3
Query: 132 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 233
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 4e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +1
Query: 247 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 426
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.53
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 556 TGIVLDSGDGVSHTVPI 606
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -2
Query: 230 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 114
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 57 CRRVNTSVPTQTHTK--FKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 227
C T +P + FK+ A+V+DNG G+ K GFAGD PR + P++VG P+
Sbjct: 676 CTAFATVIPRTKKRRYSFKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQ 734
Score = 41.9 bits (94), Expect = 7e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 740 VRDIKEKLCYVALXFXQEMXXXXXXXXLXKSYEXPDGQVITIG 868
V DIKEK+CY++ +E+ L K Y PDGQ+I+IG
Sbjct: 840 VNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIG 882
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +1
Query: 520 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALAH 630
Q LSLYASG T G+ L SG + IYEG+ L H
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNH 803
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 41.9 bits (94), Expect = 7e-04
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Frame = +1
Query: 154 ACARPVSPATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSKRGILTLKY--PIE 327
AC++ + A+ + AP S P+ + A ++ ++GD+ + + L Y P +
Sbjct: 242 ACSQKIGFASNQ-APRSIPNAIFKAKSE------RRKLFIGDQIEECKDYSALFYVLPFQ 294
Query: 328 HGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKXNREKMTQIMFETFNSPAM 507
G + NWD ++IW +TF E + M +I+FE +N A+
Sbjct: 295 KGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEILFEEYNFKAL 334
Query: 508 YVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEG 615
A LS Y S +V+D+G +H VP++ G
Sbjct: 335 SRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNG 376
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 123 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGR 239
+A LV+D G+ K GFA + APR++ P+ + + + + R
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSERR 270
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 39.9 bits (89), Expect = 0.003
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 8/45 (17%)
Frame = +1
Query: 514 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYAL 624
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY +
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVI 84
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 364 IWHHTFYNELRVAPEEHPVLLTEAPLNPKXNREKMTQIMFETFNSPAMYVAIQAVLSLYA 543
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 544 SGRTTGIV 567
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 35.5 bits (78), Expect = 0.057
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 10 YRFTIGNS*DLTRSLAAVESIPASQHKHTQSSRCATTMLLRL*STM-APACARPVSPATT 186
YR G++ ++R+ ++ E P+ + T S C T+L+R T+ APA P SPAT
Sbjct: 82 YRHRNGHNCSISRNSSS-EICPSCRALETSLSSCLATLLVRPLETIPAPAPTTPTSPATP 140
Query: 187 RPAPSSR 207
P R
Sbjct: 141 ASGPPIR 147
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.71
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 103 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 207
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 310 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKXNRE 462
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 31.5 bits (68), Expect = 0.93
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 821 LXKSYEXPDGQVITIGXKR 877
L K+YE PDGQVI+IG +R
Sbjct: 10 LEKTYELPDGQVISIGNER 28
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 103 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 207
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 RAVFPSIV----GRPRHQGRDGRYGPERLLRG*RGPEQERYPHSEVPHR 326
R+V PS V G R + R PER +G ++ER HSE P R
Sbjct: 988 RSVSPSAVKRTKGSKRSESRSVSRSPERDRKGRDSAKKERQSHSESPQR 1036
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 457 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 567
+E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 422 KEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 454 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 603
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 175 PATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSKRG-ILTLKYPIEHGIITNW- 348
P P SRP V L+ V V ++ G + K+ ++TL + I G+ +
Sbjct: 429 PWAPEPENFSRP--VTLSQNVVSVTGREESGGSGTQVCRKKAPLITLSHVIRMGLALSLV 486
Query: 349 -DDMEKIWHHTFYN 387
D EK+W+HT N
Sbjct: 487 SDVKEKVWYHTCPN 500
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -2
Query: 605 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLXLGLRGAS 429
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 428 VSSTGCSSGATRSSL*KVW 372
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 280 RHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMPEP 146
RH R LS Y P W + G T R PAKP+L++P P
Sbjct: 520 RHYNR-LSNQY----PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 439 LNPKXNREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 567
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 88 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 213
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 103 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 207
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -3
Query: 292 CSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPAL 161
C+ P S GP R S P RG PT +RG +P K A+
Sbjct: 1301 CTTPHRSSASF-GPNRVSTPK-RGSPTSRNTPSRGLRTPVKTAM 1342
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 28.3 bits (60), Expect = 8.7
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Frame = -2
Query: 596 VWE--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLXLG 444
VWE T P + T+P + + Y S +W+ L N ++++F LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 443 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMIPCSMGYFRVRIPLLLWAS 279
L A + T C T +L ++ ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,318,751
Number of Sequences: 59808
Number of extensions: 480754
Number of successful extensions: 1534
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2514529411
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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