Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_N03
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79759-8|CAE45097.1|  619|Caenorhabditis elegans Hypothetical pr...   190   1e-48
AF026213-6|AAB71307.1|  655|Caenorhabditis elegans Temporarily a...    69   4e-12
AC024775-3|AAK68454.1|  580|Caenorhabditis elegans Hypothetical ...    37   0.016
AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical...    29   3.2  
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U10438-3|AAA19082.2|  242|Caenorhabditis elegans Drosophila odd-...    28   7.4  
AF039052-2|AAF98629.1|  400|Caenorhabditis elegans Hypothetical ...    28   7.4  
U58745-2|AAU05593.1|  569|Caenorhabditis elegans Hypothetical pr...    28   9.8  
U58745-1|AAB00620.2|  574|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>Z79759-8|CAE45097.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK858.6 protein.
          Length = 619

 Score =  190 bits (463), Expect = 1e-48
 Identities = 92/176 (52%), Positives = 117/176 (66%), Gaps = 1/176 (0%)
 Frame = +1

Query: 235 GFYVPGVAPVEFKKGQKIEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSENLGEVL 414
           GFYVPGVAPV+FK G  I+VKA+K+TS +  +P+EYYS+P C P NG   YKSENLGEV+
Sbjct: 21  GFYVPGVAPVDFKAGDVIDVKAIKLTSSNNIMPFEYYSVPFCKPANGDIQYKSENLGEVM 80

Query: 415 RGDRIVNTPYEVHMAENIXCKLLCHRKNVPINWSVEDSEKVASRIEHEYFVHLLVDNLPV 594
           RGDRIVNTPY  HM +N  C  +C  K      S E+      RI  EY  HL+VDNLPV
Sbjct: 81  RGDRIVNTPYAFHMKKNEQCVSVCSNK-----LSKENVALFKERIRQEYSAHLIVDNLPV 135

Query: 595 ATKVINVETLERTIEQGYRLGYMSE-GKAYINNHXXXXXKYHKHSQDSYRVVGFEV 759
           AT +   ++ +   + GYRLG++ +  K ++NNH     KYH+H+   YRVVGFEV
Sbjct: 136 ATVINPAQSGDVYYDLGYRLGWIGDNAKVFLNNHLQFVVKYHQHTPGLYRVVGFEV 191


>AF026213-6|AAB71307.1|  655|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 123 protein.
          Length = 655

 Score = 68.9 bits (161), Expect = 4e-12
 Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
 Frame = +1

Query: 238 FYVPGVAPVEFKKGQK------IEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSEN 399
           FY+PG+APV F + +K      I +    + S  + +PYEY+S   C           EN
Sbjct: 23  FYLPGLAPVNFCEVEKANCPSNISLYVNHLDSDRSVIPYEYHSFDFCTVNEDESPV--EN 80

Query: 400 LGEVLRGDRIVNTPYEVHMAENIXCKLLCHRKNVPINWSVEDSEK---VASRIEHEYFVH 570
           LG+VL G+RI  +PY+V   +   C+L+C  K      S +D  K   +   +   Y  H
Sbjct: 81  LGQVLFGERIRPSPYKVAFLQEEKCRLVCDTKKY-ARGSADDLAKLRLLQRAMTLNYQHH 139

Query: 571 LLVDNLPVATKVINVETLERTIEQGYRLGYMSEGKAYINNHXXXXXKY 714
            +VDN+PV     N++ ++     G+ +G   + + Y ++      KY
Sbjct: 140 WIVDNMPVTFCFKNLQNMD-VCTTGFPVGCFVDEQGYQHDACVLNQKY 186


>AC024775-3|AAK68454.1|  580|Caenorhabditis elegans Hypothetical
           protein Y41D4A.4 protein.
          Length = 580

 Score = 37.1 bits (82), Expect = 0.016
 Identities = 20/90 (22%), Positives = 42/90 (46%)
 Frame = +1

Query: 325 QLPYEYYSLPLCLPKNGTFVYKSENLGEVLRGDRIVNTPYEVHMAENIXCKLLCHRKNVP 504
           Q  Y Y+SLP C  +     +  E +GE L G  +  +  ++    N    ++C +K   
Sbjct: 44  QETYTYFSLPFCKGEKKEIGHYHETMGESLLGVELEFSGLDIKFRTNTKKTVVCEKK--- 100

Query: 505 INWSVEDSEKVASRIEHEYFVHLLVDNLPV 594
              +  D + +   I++ Y+  + +D++P+
Sbjct: 101 --LTETDYKTLLYAIQNSYYYQMYLDDMPI 128


>AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical
           protein Y43F8C.14 protein.
          Length = 709

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 508 NWSVEDSEKVASRIEHEYFVHLLVDNLP 591
           N S+E+S +++   EHE+ + LL+D  P
Sbjct: 648 NNSIEESREMSQGAEHEFHIELLIDQDP 675


>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
           protein R09H3.1 protein.
          Length = 1073

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 72  SCQTKIKPVXLFSKFKNVKIFLLHVVQCSCFKT 170
           SCQ K+    L +KF   K+F+ H+   S   T
Sbjct: 595 SCQQKLSQFVLLTKFTKTKVFINHINSVSNLST 627


>U10438-3|AAA19082.2|  242|Caenorhabditis elegans Drosophila
           odd-skipped-like protein1 protein.
          Length = 242

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
 Frame = +3

Query: 162 FKTRSCFKXYLQXDSIHYHNF---KKLWLLCTWCGTGRVQKRSKN*SKSC*DDQHSYSIT 332
           F   +C K + + D +  H +   K+    C  CG G  Q R+ N  +SC   Q   S T
Sbjct: 156 FHCETCGKSFRRQDHLRDHKYIHAKEKPHKCEICGKGFCQLRTLNVHRSCHHVQEPISET 215

Query: 333 IRILFIAF 356
             +  I F
Sbjct: 216 FMLGAIKF 223


>AF039052-2|AAF98629.1|  400|Caenorhabditis elegans Hypothetical
           protein T22D1.8 protein.
          Length = 400

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
 Frame = +1

Query: 364 PKNGTFVYKSENLGEVLRGDRIVNTPYEVHMAENIXCKLLCHRKNVPI----NWSVEDSE 531
           PK   F   S+N  E L+    V     VH+ + +  KL    K + +    N  +ED E
Sbjct: 84  PKMCVFENSSDNQLEELKIPNGVIMTQPVHLGDTLHLKLKMENKTMEVFQLSNAIIEDME 143

Query: 532 KVASRIEHEYFVHLLVDNLPV-ATKVINVETLERTIEQGY 648
           K +   E + F+ L + N  V  +K IN  T    +  GY
Sbjct: 144 KGS---EQQVFLELSIYNRYVDKSKAIN-HTKAHKVNVGY 179


>U58745-2|AAU05593.1|  569|Caenorhabditis elegans Hypothetical
           protein C10G6.1b protein.
          Length = 569

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/56 (23%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +1

Query: 517 VEDSEKVASRIEHEYFVHLL-VDNLPVATKVINVETLERTIEQGYRLGYMSEGKAY 681
           + D+ +VAS + H+Y VH+  V +  VA  ++  E   +++ +   + +++  + Y
Sbjct: 376 IHDARRVASLLAHKYAVHMRNVFDTQVAHSLLQHEKFNKSLNEMRPISFINLQRVY 431


>U58745-1|AAB00620.2|  574|Caenorhabditis elegans Hypothetical
           protein C10G6.1a protein.
          Length = 574

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/56 (23%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +1

Query: 517 VEDSEKVASRIEHEYFVHLL-VDNLPVATKVINVETLERTIEQGYRLGYMSEGKAY 681
           + D+ +VAS + H+Y VH+  V +  VA  ++  E   +++ +   + +++  + Y
Sbjct: 376 IHDARRVASLLAHKYAVHMRNVFDTQVAHSLLQHEKFNKSLNEMRPISFINLQRVY 431


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,980,913
Number of Sequences: 27780
Number of extensions: 340262
Number of successful extensions: 752
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)