Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_N02
(853 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 67 1e-11
04_04_1392 + 33201015-33201600,33202030-33202406,33202528-332026... 65 8e-11
06_03_0975 - 26471438-26472109,26472189-26472284,26472372-264724... 52 6e-07
04_01_0033 + 391565-391974,393484-393520,394959-395483 51 1e-06
04_01_0035 - 433848-434372,434905-435381 50 2e-06
01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010 48 1e-05
04_01_0038 + 446314-446787,446829-447350 47 2e-05
04_01_0036 + 436592-437572 44 2e-04
07_01_1064 + 9385330-9385432,9386181-9386236,9386938-9387082,938... 35 0.072
06_03_0085 + 16431503-16431568,16431981-16432152,16432402-164324... 34 0.17
07_01_1060 + 9330217-9330219,9330490-9330561,9330773-9330917,933... 33 0.29
03_01_0183 - 1474202-1474276,1474511-1474627,1474791-1474847,147... 31 0.88
06_03_0086 + 16458881-16458952,16461795-16461966,16462621-164628... 31 1.2
11_06_0610 - 25449085-25453284 31 1.5
09_04_0580 + 18681019-18681475,18682637-18682920,18683088-186833... 31 1.5
12_02_0063 + 13098519-13099585,13099759-13099906 29 3.6
10_08_0736 + 20205934-20206551,20207258-20207426,20207562-202076... 29 4.7
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 67.3 bits (157), Expect = 1e-11
Identities = 39/76 (51%), Positives = 46/76 (60%)
Frame = +1
Query: 286 RGGLIQETDFLXALKSGKVGGAALDVFEXEPPTDPVTLEIIQQPAVIATPHLGASTKEAQ 465
RGG+I E + AL SGKV AALDVF EPP L + + V TPHLGAST EAQ
Sbjct: 319 RGGVIDEDALVRALDSGKVAQAALDVFTEEPPAKDSKLVLHEN--VTVTPHLGASTVEAQ 376
Query: 466 VRVGQEIAEQLVNLVK 513
V EIAE +V ++
Sbjct: 377 EGVAIEIAEAVVGALR 392
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 93 IGFDPFVSADQCAQFHCTKMELEDXWPLADYITLHTPXIESTRNFINADVLKXCXKGVKI 272
I DP+ AD+ + ++ AD+I+LH P +T N + GV+I
Sbjct: 255 IAHDPYAPADRARAIGAELVSFDEAIGRADFISLHMPLTPATSKVFNDESFSRMKNGVRI 314
Query: 273 INV 281
INV
Sbjct: 315 INV 317
>04_04_1392 +
33201015-33201600,33202030-33202406,33202528-33202638,
33202720-33202815,33202899-33203570
Length = 613
Score = 64.9 bits (151), Expect = 8e-11
Identities = 38/76 (50%), Positives = 45/76 (59%)
Frame = +1
Query: 286 RGGLIQETDFLXALKSGKVGGAALDVFEXEPPTDPVTLEIIQQPAVIATPHLGASTKEAQ 465
RGG+I E + AL SG V AALDVF EPP L + + V TPHLGAST EAQ
Sbjct: 301 RGGVIDEDALVRALDSGIVAQAALDVFTKEPPAPDSKLVLHEN--VTVTPHLGASTVEAQ 358
Query: 466 VRVGQEIAEQLVNLVK 513
V EIAE ++ +K
Sbjct: 359 EGVAIEIAEAVIGALK 374
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 93 IGFDPFVSADQCAQFHCTKMELEDXWPLADYITLHTPXIESTRNFINADVLKXCXKGVKI 272
I DP+ SAD+ + +ED AD+I+LH P +T +N + KGV+I
Sbjct: 237 IAHDPYASADRAHAIGVELVSMEDALTTADFISLHMPLTPATNKMLNDETFAKMKKGVRI 296
Query: 273 INV 281
INV
Sbjct: 297 INV 299
>06_03_0975 -
26471438-26472109,26472189-26472284,26472372-26472482,
26472494-26472530,26472566-26472576,26472674-26473050,
26474310-26474895
Length = 629
Score = 52.0 bits (119), Expect = 6e-07
Identities = 28/55 (50%), Positives = 34/55 (61%)
Frame = +1
Query: 349 AALDVFEXEPPTDPVTLEIIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 513
AALDVF EPP P +++ V TPHLGAST EAQ V EIAE ++ +K
Sbjct: 338 AALDVFTEEPP--PKDSKLVHHEHVTVTPHLGASTSEAQEGVALEIAEAVLGALK 390
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 93 IGFDPFVSADQCAQFHCTKMELEDXWPLADYITLHTPXIESTRNFINADVLKXCXKGVKI 272
I DP+ D+ + ++ AD+I+LH P ST + + KGV+I
Sbjct: 237 ISHDPYAPVDRARAIGVDLVSFDEAISTADFISLHMPLTPSTAKLFDDETFANMKKGVRI 296
Query: 273 INV 281
INV
Sbjct: 297 INV 299
>04_01_0033 + 391565-391974,393484-393520,394959-395483
Length = 323
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +1
Query: 283 GRGGLIQETDFLXALKSGKVGGAALDVFEXEPPTDPVTLEIIQQPAVIATPHLGASTKEA 462
GRG + E + AL+ G++ GA LDVFE EP P E+ + V+ TPH+ T E+
Sbjct: 239 GRGANVDEAALVRALREGRIAGAGLDVFEGEPKVSP---ELREMENVVLTPHVAVWTAES 295
Query: 463 Q 465
+
Sbjct: 296 R 296
>04_01_0035 - 433848-434372,434905-435381
Length = 333
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +1
Query: 286 RGGLIQETDFLXALKSGKVGGAALDVFEXEPPTDPVTLEIIQQPAVIATPHLGASTKEA 462
RGG++ E + + ALK G++ GA LDVFE EP V E++ V+ T H T E+
Sbjct: 250 RGGIVDEAELIRALKEGRIAGAGLDVFEKEP---DVPAELLSMDNVVLTAHEAVFTTES 305
>01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010
Length = 454
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/72 (34%), Positives = 38/72 (52%)
Frame = +1
Query: 283 GRGGLIQETDFLXALKSGKVGGAALDVFEXEPPTDPVTLEIIQQPAVIATPHLGASTKEA 462
GRG + E + AL G++GGA LDVFE EP V ++ V+ PH+G++T E
Sbjct: 372 GRGPHVDEAAMVAALADGRLGGAGLDVFEDEP---NVPEALLGMDNVVLVPHVGSATHET 428
Query: 463 QVRVGQEIAEQL 498
+ + + L
Sbjct: 429 RTAMADLVLGNL 440
Score = 35.5 bits (78), Expect = 0.054
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 286 RGGLIQETDFLXALKSGKVGGAALDVFEXEPPTDPVTLEIIQQPAVIATPH 438
RG + E + + AL ++GGA LDVFE EP ++ + V+ PH
Sbjct: 235 RGAHVDEPELISALLEKRLGGAGLDVFEDEPFAPE---QLFELDNVVLVPH 282
>04_01_0038 + 446314-446787,446829-447350
Length = 331
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +1
Query: 283 GRGGLIQETDFLXALKSGKVGGAALDVFEXEPPTDPVTLEIIQQPAVIATPHLGASTKEA 462
GRGGL+ E + + L+ G +GGA LDV+E EP P E+ V+ + H T E+
Sbjct: 248 GRGGLVDEAELVRCLREGVLGGAGLDVYENEPEVPP---ELWGMDNVVLSDHRAVITPES 304
>04_01_0036 + 436592-437572
Length = 326
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +1
Query: 286 RGGLIQETDFLXALKSGKVGGAALDVFEXEPPTDPVTLEIIQQPAVIATPHLGASTKEAQ 465
RG + E + + AL G+V GA L+VF+ EP P E+ V+ TPH T E+
Sbjct: 242 RGANVDEAELVRALAEGRVAGAGLEVFDDEPNVPP---ELWAMDNVVLTPHQAIFTPESM 298
Query: 466 VRVGQEIAEQL 498
+ + + L
Sbjct: 299 ADLSRVVLANL 309
>07_01_1064 +
9385330-9385432,9386181-9386236,9386938-9387082,
9387126-9387298,9388058-9388129,9388222-9388336,
9388418-9388521,9388604-9388645,9388932-9389144,
9389621-9389689
Length = 363
Score = 35.1 bits (77), Expect = 0.072
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 286 RGGLIQETDFLXALKSGKVGGAALDVFEXEP--PTDPVTLEIIQQPAVIATPHLGASTK 456
RG L+ LKSG +GG +DV EP P DP I++ VI TPH+ T+
Sbjct: 279 RGRLLDYDAVFNHLKSGHLGGLGIDVAWTEPYDPEDP----ILKFSNVIITPHIAGVTE 333
>06_03_0085 +
16431503-16431568,16431981-16432152,16432402-16432464,
16432792-16433332,16433419-16433543,16433988-16434100,
16434565-16434678
Length = 397
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/81 (27%), Positives = 35/81 (43%)
Frame = +1
Query: 286 RGGLIQETDFLXALKSGKVGGAALDVFEXEPPTDPVTLEIIQQPAVIATPHLGASTKEAQ 465
RG ++ A SG+V G DV+ +P + A+ TPH+ +T +AQ
Sbjct: 303 RGAIMDTQAVADACSSGQVAGYGGDVWFPQPAPKDHPWRYMPNHAM--TPHISGTTIDAQ 360
Query: 466 VRVGQEIAEQLVNLVKPGTFP 528
+R + + L K FP
Sbjct: 361 LRYAAGVKDMLDRYFKGEDFP 381
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 153 ELEDXWPLADYITLHTPXIESTRNFINADVLKXCXKGVKIIN 278
+L+ P D I ++TP E TR N + + KGV I+N
Sbjct: 259 DLDAMLPKCDVIVINTPLTEKTRGMFNKERIAKMKKGVIIVN 300
>07_01_1060 +
9330217-9330219,9330490-9330561,9330773-9330917,
9331006-9331133,9331689-9331803,9331881-9331984,
9332356-9332568,9332637-9332657
Length = 266
Score = 33.1 bits (72), Expect = 0.29
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 286 RGGLIQETDFLXALKSGKVGGAALDVFEXEP--PTDPVTLEIIQQPAVIATPHLGASTK 456
RG ++ LKSG +GG +DV EP P DP I++ VI TPH T+
Sbjct: 198 RGHILDYDAVFDHLKSGHLGGLGIDVAWTEPYDPEDP----ILKFSNVIITPHTAGVTE 252
>03_01_0183 -
1474202-1474276,1474511-1474627,1474791-1474847,
1475149-1475196,1475313-1476101,1476516-1476646,
1476769-1476937,1477954-1478541
Length = 657
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 156 LEDXWPLADYITLHTPXIESTRNFINADVLKXCXKGVKIINVG 284
L D +D ++LH T + +NAD L+ G I+N G
Sbjct: 218 LNDLLAASDLVSLHCTLTNDTMHILNADCLQHVKPGAFIVNTG 260
>06_03_0086 +
16458881-16458952,16461795-16461966,16462621-16462889,
16463045-16463316,16463409-16463533,16463852-16463964,
16464579-16464692
Length = 378
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 153 ELEDXWPLADYITLHTPXIESTRNFINADVLKXCXKGVKIIN 278
+L+ P D + ++ P E TR N + + KGV I+N
Sbjct: 240 DLDAMLPKCDVVVINMPLTEKTRGMFNKERIAKMKKGVTIVN 281
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/81 (25%), Positives = 32/81 (39%)
Frame = +1
Query: 286 RGGLIQETDFLXALKSGKVGGAALDVFEXEPPTDPVTLEIIQQPAVIATPHLGASTKEAQ 465
RG ++ A SG V G DV+ +P + A+ TPH +T + Q
Sbjct: 284 RGAIMDTQAVADACASGHVAGYGGDVWFPQPAPKDHPWRYMPNHAM--TPHCSGTTIDGQ 341
Query: 466 VRVGQEIAEQLVNLVKPGTFP 528
+R + + L K FP
Sbjct: 342 LRYAAGVKDMLDRYFKGEDFP 362
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/78 (24%), Positives = 31/78 (39%)
Frame = -1
Query: 538 PVESGMFPASPGSRAAQQSPGQLSPELP**RPPDVEWQLQQAAE*SPK*QDRSAAPARTR 359
P E P P S + +P + +P P PP+ + + E SP + +P +
Sbjct: 744 PPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSE 803
Query: 358 PEQPRPPFQTSEPARNXS 305
P P ++S P S
Sbjct: 804 KSPPTPAEESSPPTPEKS 821
>09_04_0580 +
18681019-18681475,18682637-18682920,18683088-18683315,
18683415-18683864
Length = 472
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 268 KSSTWGRGG-LIQETDFLXALKSGKVGGAALDVFEXEPPTDPVTLEIIQQPAVIATPHLG 444
K+ WG GG ++QE D + A++ G+ GG E P + A+ A G
Sbjct: 22 KAEEWGGGGGVVQEGDVVEAVRVGRGGGPGPGAAVLEAPFKGGRAAL--HKAMHAAFKRG 79
Query: 445 ASTKEAQVRVGQEI 486
++ E +VR G E+
Sbjct: 80 DTSVEVRVRGGSEL 93
>12_02_0063 + 13098519-13099585,13099759-13099906
Length = 404
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Frame = -1
Query: 490 QQSPGQLSPELP**RPPDVEWQLQQAAE*SPK*QD----RSAAPAR--TRPEQPRPPFQT 329
QQ+P Q P P PP +++ A P SAAP R P Q PPFQT
Sbjct: 208 QQAPPQKRPAAPVAEPPCATKKMKGAVSAKPMAPQSSVTASAAPPRCAVAPSQHHPPFQT 267
>10_08_0736 +
20205934-20206551,20207258-20207426,20207562-20207692,
20208100-20208144,20208145-20208939,20209081-20209128,
20209504-20209620,20210087-20210161
Length = 665
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 156 LEDXWPLADYITLHTPXIESTRNFINADVLKXCXKGVKIINVG 284
L D +D ++LH T + +NA+ L+ G I+N G
Sbjct: 228 LNDLLTASDLVSLHCALTNDTTHILNAERLQHIKPGAFIVNTG 270
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,491,447
Number of Sequences: 37544
Number of extensions: 251852
Number of successful extensions: 869
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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