Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_N02
         (853 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   6.7  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   6.7  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        23   8.9  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 301 QETDFLXALKSGKVGGAALDVFEXEPPTDPVTLEIIQQP 417
           ++ D L +L + KVGG        +PPT P+      QP
Sbjct: 179 RDRDVLNSLLAAKVGGGQPSASPRQPPT-PLPRRSSAQP 216


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 186 CSPLEAKXPPAPSWCNGTGRTDQQTRKGRIR 94
           C+P+  + PP P W N T R  ++ R   +R
Sbjct: 323 CTPI-FRSPPNPPWSNRTLRNLKKDRMKYLR 352


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 388 DRSAAPARTRPEQPRPPFQTSEPARNXSL 302
           D + AP+  RP  P PP  T+ P++  +L
Sbjct: 54  DGTPAPSTVRPRPPAPP--TNAPSQLPAL 80


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,470
Number of Sequences: 2352
Number of extensions: 8559
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)