Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_M22
(918 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VVE5 Cluster: CG32169-PA; n=9; Endopterygota|Rep: CG3... 54 5e-06
UniRef50_Q4S8N9 Cluster: Chromosome 7 SCAF14703, whole genome sh... 41 0.039
UniRef50_Q8CD63 Cluster: 13 days embryo male testis cDNA, RIKEN ... 41 0.051
UniRef50_Q32LZ4 Cluster: Msi2h protein; n=4; Eutheria|Rep: Msi2h... 41 0.051
UniRef50_O43347 Cluster: RNA-binding protein Musashi homolog 1; ... 39 0.21
UniRef50_Q21911 Cluster: Putative uncharacterized protein msi-1;... 36 1.1
UniRef50_Q8MS04 Cluster: RH49436p; n=9; Endopterygota|Rep: RH494... 36 1.9
UniRef50_Q6BL35 Cluster: Debaryomyces hansenii chromosome F of s... 35 2.5
UniRef50_Q6IL23 Cluster: HDC10635; n=1; Drosophila melanogaster|... 35 3.3
UniRef50_O14979 Cluster: Heterogeneous nuclear ribonucleoprotein... 35 3.3
UniRef50_A7BBQ4 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_A5D9N5 Cluster: Lymphotoxin beta; n=1; Sus scrofa|Rep: ... 34 4.4
UniRef50_UPI0000DA22B5 Cluster: PREDICTED: hypothetical protein;... 34 5.9
UniRef50_A5V1J9 Cluster: Asparagine synthase; n=5; Chloroflexace... 34 5.9
UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n... 34 5.9
UniRef50_A2AX49 Cluster: RNA recognition motif 1; n=1; Guillardi... 33 7.7
UniRef50_Q5K6W6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
UniRef50_A6RA22 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 7.7
UniRef50_A3LZT4 Cluster: Predicted protein; n=1; Pichia stipitis... 33 7.7
>UniRef50_Q9VVE5 Cluster: CG32169-PA; n=9; Endopterygota|Rep:
CG32169-PA - Drosophila melanogaster (Fruit fly)
Length = 369
Score = 54.0 bits (124), Expect = 5e-06
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +1
Query: 196 SPAEVPNDPGKMFVGGLSWQTSP 264
SP+EVPNDPGKMF+GGLSWQTSP
Sbjct: 20 SPSEVPNDPGKMFIGGLSWQTSP 42
>UniRef50_Q4S8N9 Cluster: Chromosome 7 SCAF14703, whole genome
shotgun sequence; n=4; Clupeocephala|Rep: Chromosome 7
SCAF14703, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 157
Score = 41.1 bits (92), Expect = 0.039
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 178 NQDVARSPAEVPNDPGKMFVGGLSWQTSP 264
+Q + S + +DPGKMF+GGLSWQTSP
Sbjct: 6 SQATSGSLNDSQHDPGKMFIGGLSWQTSP 34
>UniRef50_Q8CD63 Cluster: 13 days embryo male testis cDNA, RIKEN
full-length enriched library, clone:6030413L18
product:Musashi homolog 2 (Drosophila), full insert
sequence; n=3; Deuterostomia|Rep: 13 days embryo male
testis cDNA, RIKEN full-length enriched library,
clone:6030413L18 product:Musashi homolog 2 (Drosophila),
full insert sequence - Mus musculus (Mouse)
Length = 192
Score = 40.7 bits (91), Expect = 0.051
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1
Query: 214 NDPGKMFVGGLSWQTSP 264
+DPGKMF+GGLSWQTSP
Sbjct: 18 HDPGKMFIGGLSWQTSP 34
>UniRef50_Q32LZ4 Cluster: Msi2h protein; n=4; Eutheria|Rep: Msi2h
protein - Mus musculus (Mouse)
Length = 193
Score = 40.7 bits (91), Expect = 0.051
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1
Query: 214 NDPGKMFVGGLSWQTSP 264
+DPGKMF+GGLSWQTSP
Sbjct: 18 HDPGKMFIGGLSWQTSP 34
>UniRef50_O43347 Cluster: RNA-binding protein Musashi homolog 1;
n=65; Euteleostomi|Rep: RNA-binding protein Musashi
homolog 1 - Homo sapiens (Human)
Length = 362
Score = 38.7 bits (86), Expect = 0.21
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 166 METQNQDVARSPAEVPNDPGKMFVGGLSWQTS 261
MET + + P+DP KMF+GGLSWQT+
Sbjct: 1 METDAPQPGLASPDSPHDPCKMFIGGLSWQTT 32
>UniRef50_Q21911 Cluster: Putative uncharacterized protein msi-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein msi-1 - Caenorhabditis elegans
Length = 320
Score = 36.3 bits (80), Expect = 1.1
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +1
Query: 217 DPGKMFVGGLSWQTS 261
DPGKMF+GGLSWQT+
Sbjct: 43 DPGKMFIGGLSWQTT 57
>UniRef50_Q8MS04 Cluster: RH49436p; n=9; Endopterygota|Rep: RH49436p
- Drosophila melanogaster (Fruit fly)
Length = 634
Score = 35.5 bits (78), Expect = 1.9
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 220 PGKMFVGGLSWQTSPGK 270
PGK+FVGGLSWQTS K
Sbjct: 202 PGKLFVGGLSWQTSSDK 218
>UniRef50_Q6BL35 Cluster: Debaryomyces hansenii chromosome F of
strain CBS767 of Debaryomyces hansenii; n=4;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
F of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 495
Score = 35.1 bits (77), Expect = 2.5
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 136 GSHRVPAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQTS 261
G +P P Q Q + P+ + D GKMF+GGL+W T+
Sbjct: 143 GGMPLPPQPPQPPQPQQLP--PSNMGKDHGKMFIGGLNWDTT 182
>UniRef50_Q6IL23 Cluster: HDC10635; n=1; Drosophila
melanogaster|Rep: HDC10635 - Drosophila melanogaster
(Fruit fly)
Length = 219
Score = 34.7 bits (76), Expect = 3.3
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +1
Query: 226 KMFVGGLSWQTSPGKS----SKDISEEQRKAARSLCGHVT 333
KMF+GGLSWQTSP S + + + QR S G +T
Sbjct: 85 KMFIGGLSWQTSPAASWPHGAGKLGKSQRAKKNSQKGQLT 124
>UniRef50_O14979 Cluster: Heterogeneous nuclear ribonucleoprotein
D-like; n=24; Mammalia|Rep: Heterogeneous nuclear
ribonucleoprotein D-like - Homo sapiens (Human)
Length = 420
Score = 34.7 bits (76), Expect = 3.3
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 217 DPGKMFVGGLSWQTSPGKSSKDISEEQRKAARSL-CGHVTEPLWG 348
D GKMF+GGLSW T S KD++E + + C T+P+ G
Sbjct: 146 DDGKMFIGGLSWDT----SKKDLTEYLSRFGEVVDCTIKTDPVTG 186
>UniRef50_A7BBQ4 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 481
Score = 34.3 bits (75), Expect = 4.4
Identities = 22/77 (28%), Positives = 29/77 (37%)
Frame = +1
Query: 118 VVVVPTGSHRVPAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQTSPGKSSKDISEEQ 297
V P +VPAP Q V+ PA+ G + S P S +D+ Q
Sbjct: 286 VPAAPAAPAQVPAPPSWGAPAQQVSPQPAQASYGGGGQYAAPASGVPGPPPSRRDVQTVQ 345
Query: 298 RKAARSLCGHVTEPLWG 348
R A S G + WG
Sbjct: 346 RSGA-SQWGGAGQSQWG 361
>UniRef50_A5D9N5 Cluster: Lymphotoxin beta; n=1; Sus scrofa|Rep:
Lymphotoxin beta - Sus scrofa (Pig)
Length = 278
Score = 34.3 bits (75), Expect = 4.4
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +1
Query: 34 LKILSLVP---GSR*CSRATPGAVPAAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPA 204
L +L+LVP G A PG A + + P+ S PAP + Q +R+P
Sbjct: 41 LAVLALVPQEQGELVTGTADPGTQAEAQQRLGKSRPSPSLGFPAPIHLHPQTPSPSRNPG 100
Query: 205 EVPNDPGKMFVGG 243
P PG + GG
Sbjct: 101 APPLGPGALSAGG 113
>UniRef50_UPI0000DA22B5 Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 237
Score = 33.9 bits (74), Expect = 5.9
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +1
Query: 82 TPGAVPAAYRSIVVVVPTGSHRVPAPSPME-TQNQDVARSPAEVPNDPGKMFVGGLSWQT 258
TPG+ PA S P S R P+P+P+ P +PG +F GL
Sbjct: 161 TPGSRPAGAASSAHRSPPASIRSPSPAPLRGCLRPGRGGRAVPFPAEPGSVFASGLGLSA 220
Query: 259 SP 264
SP
Sbjct: 221 SP 222
>UniRef50_A5V1J9 Cluster: Asparagine synthase; n=5;
Chloroflexaceae|Rep: Asparagine synthase - Roseiflexus
sp. RS-1
Length = 665
Score = 33.9 bits (74), Expect = 5.9
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +1
Query: 31 FLKILSLVPGSR*CSRATPGAVPAAYRSIVVVVPTGSHRVPAPSPMETQNQDV 189
F + SL PG C R T G+ A R V +P G HRV AP + +D+
Sbjct: 230 FAGVRSLPPGH--CMRITDGSPAAPRRYYDVALPDGHHRVQAPETIIAAYRDL 280
>UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n=1;
Schizosaccharomyces pombe|Rep: mRNA cleavage factor
complex subunit - Schizosaccharomyces pombe (Fission
yeast)
Length = 474
Score = 33.9 bits (74), Expect = 5.9
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 178 NQDVARSPAEVPNDPGKMFVGGLSWQTSPGKSSKDISEE 294
N+D A + + GKMF+GGL+W+T+ S +D E+
Sbjct: 148 NEDNAEETSPFNREDGKMFIGGLNWETT-DDSLRDYFEQ 185
>UniRef50_A2AX49 Cluster: RNA recognition motif 1; n=1; Guillardia
theta|Rep: RNA recognition motif 1 - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 33.5 bits (73), Expect = 7.7
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 193 RSPAEVPNDPGKMFVGGLSWQ 255
R P + P DP K+FVGGLSW+
Sbjct: 78 RGPPDGPIDPLKLFVGGLSWE 98
>UniRef50_Q5K6W6 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 480
Score = 33.5 bits (73), Expect = 7.7
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +1
Query: 199 PAEVPNDPGKMFVGGLSWQTS 261
P+++P D GKMF+GGL+W+T+
Sbjct: 105 PSDMP-DEGKMFIGGLNWETT 124
>UniRef50_A6RA22 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1676
Score = 33.5 bits (73), Expect = 7.7
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 82 TPGAVPAAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVP 213
TP P R V VP+ P+P+P E Q+ R P P
Sbjct: 1371 TPSKPPMTLRQTVAGVPSPQSSTPSPAPQEQQHAQETRLPPSTP 1414
>UniRef50_A3LZT4 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 481
Score = 33.5 bits (73), Expect = 7.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 151 PAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQTS 261
P P P + V P+ + + GKMF+GGL+W T+
Sbjct: 139 PVPPPPQPP---VQHQPSSMGRETGKMFIGGLNWDTT 172
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,595,001
Number of Sequences: 1657284
Number of extensions: 9312533
Number of successful extensions: 34954
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 33092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34862
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84031265255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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