Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_M22
(918 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122226-1|AAM52738.1| 369|Drosophila melanogaster RE25373p pro... 54 3e-07
AE014296-2876|AAF49366.3| 369|Drosophila melanogaster CG32169-P... 54 3e-07
X79340-1|CAA55898.2| 213|Drosophila melanogaster musashi protein. 36 0.10
X79339-1|CAA55897.1| 606|Drosophila melanogaster musashi protein. 36 0.10
AY119171-1|AAM51031.1| 634|Drosophila melanogaster RH49436p pro... 36 0.10
AY051802-1|AAK93226.1| 606|Drosophila melanogaster LD31631p pro... 36 0.10
AE014297-3816|AAF56478.2| 606|Drosophila melanogaster CG5099-PA... 36 0.10
AE014297-3812|AAN14056.2| 634|Drosophila melanogaster CG5099-PB... 36 0.10
X62639-1|CAA44505.1| 385|Drosophila melanogaster hrp48.1 protein. 30 5.1
DQ062784-1|AAY56657.1| 421|Drosophila melanogaster heterogeneou... 30 5.1
AY128430-1|AAM75023.1| 421|Drosophila melanogaster GH26816p pro... 30 5.1
AY069699-1|AAL39844.1| 421|Drosophila melanogaster LD46853p pro... 30 5.1
AE014134-1193|AAN10605.1| 421|Drosophila melanogaster CG10377-P... 30 5.1
AE014134-1192|AAF52457.1| 421|Drosophila melanogaster CG10377-P... 30 5.1
AE014134-1191|AAF52456.1| 421|Drosophila melanogaster CG10377-P... 30 5.1
AE014298-2511|AAF48688.1| 1048|Drosophila melanogaster CG9059-PB... 29 6.8
AE014298-2510|AAN09430.2| 1077|Drosophila melanogaster CG9059-PA... 29 6.8
S51715-1|AAB24627.1| 44|Drosophila melanogaster RNA recognitio... 29 8.9
>AY122226-1|AAM52738.1| 369|Drosophila melanogaster RE25373p
protein.
Length = 369
Score = 54.0 bits (124), Expect = 3e-07
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +1
Query: 196 SPAEVPNDPGKMFVGGLSWQTSP 264
SP+EVPNDPGKMF+GGLSWQTSP
Sbjct: 20 SPSEVPNDPGKMFIGGLSWQTSP 42
>AE014296-2876|AAF49366.3| 369|Drosophila melanogaster CG32169-PA
protein.
Length = 369
Score = 54.0 bits (124), Expect = 3e-07
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +1
Query: 196 SPAEVPNDPGKMFVGGLSWQTSP 264
SP+EVPNDPGKMF+GGLSWQTSP
Sbjct: 20 SPSEVPNDPGKMFIGGLSWQTSP 42
>X79340-1|CAA55898.2| 213|Drosophila melanogaster musashi protein.
Length = 213
Score = 35.5 bits (78), Expect = 0.10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 220 PGKMFVGGLSWQTSPGK 270
PGK+FVGGLSWQTS K
Sbjct: 174 PGKLFVGGLSWQTSSDK 190
>X79339-1|CAA55897.1| 606|Drosophila melanogaster musashi protein.
Length = 606
Score = 35.5 bits (78), Expect = 0.10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 220 PGKMFVGGLSWQTSPGK 270
PGK+FVGGLSWQTS K
Sbjct: 174 PGKLFVGGLSWQTSSDK 190
>AY119171-1|AAM51031.1| 634|Drosophila melanogaster RH49436p
protein.
Length = 634
Score = 35.5 bits (78), Expect = 0.10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 220 PGKMFVGGLSWQTSPGK 270
PGK+FVGGLSWQTS K
Sbjct: 202 PGKLFVGGLSWQTSSDK 218
>AY051802-1|AAK93226.1| 606|Drosophila melanogaster LD31631p
protein.
Length = 606
Score = 35.5 bits (78), Expect = 0.10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 220 PGKMFVGGLSWQTSPGK 270
PGK+FVGGLSWQTS K
Sbjct: 174 PGKLFVGGLSWQTSSDK 190
>AE014297-3816|AAF56478.2| 606|Drosophila melanogaster CG5099-PA,
isoform A protein.
Length = 606
Score = 35.5 bits (78), Expect = 0.10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 220 PGKMFVGGLSWQTSPGK 270
PGK+FVGGLSWQTS K
Sbjct: 174 PGKLFVGGLSWQTSSDK 190
>AE014297-3812|AAN14056.2| 634|Drosophila melanogaster CG5099-PB,
isoform B protein.
Length = 634
Score = 35.5 bits (78), Expect = 0.10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 220 PGKMFVGGLSWQTSPGK 270
PGK+FVGGLSWQTS K
Sbjct: 202 PGKLFVGGLSWQTSSDK 218
>X62639-1|CAA44505.1| 385|Drosophila melanogaster hrp48.1 protein.
Length = 385
Score = 29.9 bits (64), Expect = 5.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 214 NDPGKMFVGGLSWQTSPGKSSK 279
++ GK+FVGGLSW+T+ S+
Sbjct: 4 DERGKLFVGGLSWETTQENLSR 25
>DQ062784-1|AAY56657.1| 421|Drosophila melanogaster heterogeneous
nuclear ribonucleoproteinprotein.
Length = 421
Score = 29.9 bits (64), Expect = 5.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 214 NDPGKMFVGGLSWQTSPGKSSK 279
++ GK+FVGGLSW+T+ S+
Sbjct: 4 DERGKLFVGGLSWETTQENLSR 25
>AY128430-1|AAM75023.1| 421|Drosophila melanogaster GH26816p
protein.
Length = 421
Score = 29.9 bits (64), Expect = 5.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 214 NDPGKMFVGGLSWQTSPGKSSK 279
++ GK+FVGGLSW+T+ S+
Sbjct: 4 DERGKLFVGGLSWETTQENLSR 25
>AY069699-1|AAL39844.1| 421|Drosophila melanogaster LD46853p
protein.
Length = 421
Score = 29.9 bits (64), Expect = 5.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 214 NDPGKMFVGGLSWQTSPGKSSK 279
++ GK+FVGGLSW+T+ S+
Sbjct: 4 DERGKLFVGGLSWETTQENLSR 25
>AE014134-1193|AAN10605.1| 421|Drosophila melanogaster CG10377-PC,
isoform C protein.
Length = 421
Score = 29.9 bits (64), Expect = 5.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 214 NDPGKMFVGGLSWQTSPGKSSK 279
++ GK+FVGGLSW+T+ S+
Sbjct: 4 DERGKLFVGGLSWETTQENLSR 25
>AE014134-1192|AAF52457.1| 421|Drosophila melanogaster CG10377-PB,
isoform B protein.
Length = 421
Score = 29.9 bits (64), Expect = 5.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 214 NDPGKMFVGGLSWQTSPGKSSK 279
++ GK+FVGGLSW+T+ S+
Sbjct: 4 DERGKLFVGGLSWETTQENLSR 25
>AE014134-1191|AAF52456.1| 421|Drosophila melanogaster CG10377-PA,
isoform A protein.
Length = 421
Score = 29.9 bits (64), Expect = 5.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 214 NDPGKMFVGGLSWQTSPGKSSK 279
++ GK+FVGGLSW+T+ S+
Sbjct: 4 DERGKLFVGGLSWETTQENLSR 25
>AE014298-2511|AAF48688.1| 1048|Drosophila melanogaster CG9059-PB,
isoform B protein.
Length = 1048
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 199 PAEVPNDPGKMFVGGLSWQTSPGKSSKDISEEQRKAARSLC 321
P+E+ N +VGGL+W +S S + EQ KA LC
Sbjct: 383 PSELSNGS---YVGGLTWASSTDLSVTVTNREQTKATTVLC 420
>AE014298-2510|AAN09430.2| 1077|Drosophila melanogaster CG9059-PA,
isoform A protein.
Length = 1077
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 199 PAEVPNDPGKMFVGGLSWQTSPGKSSKDISEEQRKAARSLC 321
P+E+ N +VGGL+W +S S + EQ KA LC
Sbjct: 412 PSELSNGS---YVGGLTWASSTDLSVTVTNREQTKATTVLC 449
>S51715-1|AAB24627.1| 44|Drosophila melanogaster RNA recognition
motif-type RNA-binding protein protein.
Length = 44
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 232 FVGGLSWQTSP 264
FVGGLSWQTSP
Sbjct: 1 FVGGLSWQTSP 11
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,597,010
Number of Sequences: 53049
Number of extensions: 443822
Number of successful extensions: 1750
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1739
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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