Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_M21
         (840 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    25   0.66 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   2.0  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   6.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   6.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   8.1  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 25.4 bits (53), Expect = 0.66
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 590 LSVFINCW*PTTW*SSVNKFFSTPHAKKSWTACSACWVG 474
           +S FI CW P    + V  F   P A  ++ +    W+G
Sbjct: 378 MSAFIVCWLPFFVLALVRPFLKNPDAIPAFLSSLFLWLG 416


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -1

Query: 144 TLHSGFRNSPRTPKIIETVQPTSLQPVLDLSN-AIKS*EF 28
           T++S  RN  RT       QP   Q V+D  N AI   E+
Sbjct: 219 TIYSRVRNLNRTHGFPNDAQPYIFQEVIDYGNEAISKREY 258


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = -1

Query: 129 FRNSPRTPKIIETVQPT-SLQP 67
           FRN+P   + I T QP+  L+P
Sbjct: 100 FRNTPEVHQAINTCQPSIPLEP 121


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 387 RSFINFSVASSHE*IAQVLE 328
           RSF+ FS+  S + +A+V++
Sbjct: 296 RSFVPFSIERSSQSVAEVMD 315


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +3

Query: 453 WRLXGEAADPAGTTGGP 503
           W    E  DPAG   GP
Sbjct: 395 WFTYQETVDPAGCNAGP 411


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,018
Number of Sequences: 438
Number of extensions: 4444
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)