Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_M20
         (861 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    27   0.25 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    25   0.58 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   5.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   5.4  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    22   5.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   5.4  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   5.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   7.2  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 557 YPRAGQNGAVWSGIQFTTTILCPTTVC 637
           Y   G   + WS +Q  TT++ PT  C
Sbjct: 297 YSAPGPTYSTWSTVQTPTTVMSPTINC 323


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +1

Query: 517 NQYGTKEAGGPXVVPPGWTEWRGLVGNSVYYNY 615
           N Y  K+AGG       WT   GL   + YY Y
Sbjct: 38  NPYALKDAGGTAADMSAWTS-AGLQPTTGYYPY 69


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 215 CSHIDR*SRCSFRWNGSDDECSTIYRERRHN 307
           C + ++  R   +W  SD+ C+T + E  +N
Sbjct: 673 CFYENKFYRQEAQWTSSDNPCTTCFCENGNN 703


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 381 HNHKTVNNSLHGGCYGENWKYH 446
           HNH+  N+++    YG    YH
Sbjct: 65  HNHQNYNSNVLSNGYGYGNYYH 86


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 381 HNHKTVNNSLHGGCYGENWKYH 446
           HNH+  N+++    YG    YH
Sbjct: 65  HNHQNYNSNVLSNGYGYGNYYH 86


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 267 MTNVQRFIGKEGITFTNSYVT 329
           +++V +FI K G  F  SYVT
Sbjct: 80  VSSVLKFIRKYGSHFIESYVT 100


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 381 HNHKTVNNSLHGGCYGENWKYH 446
           HNH+  N+++    YG    YH
Sbjct: 65  HNHQNYNSNVLSNGYGYGNYYH 86


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 381 HNHKTVNNSLHGGCYGENWKYH 446
           HNH+  N+++    YG    YH
Sbjct: 65  HNHQNYNSNVLSNGYGYGNYYH 86


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 607 SKLNSRPDRAILSSPGVPPXG 545
           S  +S  D   LS PG PP G
Sbjct: 215 SDADSDSDVVNLSKPGTPPSG 235


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,183
Number of Sequences: 336
Number of extensions: 3434
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)