Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_M20
         (861 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0514 - 19912066-19913346                                         32   0.68 
04_04_1324 + 32659752-32661972,32662067-32662761                       31   1.2  
03_03_0192 - 15308602-15308869,15309457-15309528,15310271-153103...    30   2.1  
02_04_0178 + 20672705-20672919,20673385-20673486,20673925-206740...    30   2.1  
02_05_0977 - 33239887-33240566,33241010-33241985                       30   2.7  
03_04_0134 - 17593449-17594702                                         29   6.3  
02_02_0121 + 7005356-7005418,7007533-7007632,7007713-7007810,700...    28   8.3  

>12_02_0514 - 19912066-19913346
          Length = 426

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 586 LVGNSVYYNYTLSNNGVPTFSTDSYLTDVIRXLGVSYIXN 705
           L+ NS+YY+  L +N +P F  D    +  R +G + + N
Sbjct: 116 LMSNSIYYDLLLVDNQIPFFVLDRLFNEFRRHMGANPVFN 155


>04_04_1324 + 32659752-32661972,32662067-32662761
          Length = 971

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +1

Query: 544  GPXVVPPGWTEWRGLVGNSVYYNYTLSNNGVPTFSTDSYLT 666
            G  + P GW+EW G VG    Y    +N G P   T   +T
Sbjct: 892  GDFIKPEGWSEWMGDVGLKTLYYAEYANTG-PGAGTSKRVT 931


>03_03_0192 -
           15308602-15308869,15309457-15309528,15310271-15310337,
           15310449-15310528,15310636-15310714,15310815-15310890
          Length = 213

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +2

Query: 359 FADRHVRSQPQDREQQSSRRMLWRELEISRETDVRYYT-SXKPDMTRSMRGN 511
           + DRH R   QDRE + SR +   E E  +E   R  + S  PD  R  R N
Sbjct: 139 YRDRHYRDDYQDREYRRSRSIERYERERYQEKGYRRRSRSISPDYDRRHRKN 190


>02_04_0178 +
           20672705-20672919,20673385-20673486,20673925-20674002,
           20674046-20674058
          Length = 135

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 365 DRHVRSQPQDREQQSSRRMLWRELEISRETDV 460
           D+H + Q QD   +  R+ +W  + +SR+T +
Sbjct: 90  DKHYQQQKQDVSSRKQRKKIWIHIGMSRQTSI 121


>02_05_0977 - 33239887-33240566,33241010-33241985
          Length = 551

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
 Frame = +1

Query: 415 ADAMERTGNITRNRRSLLYFXEAGYDTFYAGKYLNQYGTKEAGGPX----VVPPGWTEWR 582
           +D  + TG I+ +R  +    + G    Y G+   +Y      G      + P GW EW 
Sbjct: 427 SDPNQNTG-ISIHRCRITGAPDLGGTPVYLGRPWRRYSRTVVMGTFLDRSIAPAGWLEWS 485

Query: 583 GLVGNSVYYNYTLSNNG 633
           G  G S  Y     N G
Sbjct: 486 GQFGLSTLYYGEYGNTG 502


>03_04_0134 - 17593449-17594702
          Length = 417

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +2

Query: 254 WNG--SDDECSTIYRERRHNIH*LLCDVTDMLSKSSQFADRHVRSQ 385
           WN   SD+  S +Y    H+ H  + D    LS SS +AD  +R++
Sbjct: 214 WNSRPSDEYSSLMYNSSYHHHHDAVSDDDLELSLSSPYADTEIRTK 259


>02_02_0121 +
           7005356-7005418,7007533-7007632,7007713-7007810,
           7007933-7008021,7008111-7008171,7008253-7008339,
           7008409-7008486,7008583-7008639,7008731-7008786,
           7008877-7009012,7009103-7009324
          Length = 348

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = +1

Query: 493 TFYAGKYLNQYGTKEAGGPXVVPPGWTEW--RGLVGNSVYY 609
           T +A KY ++        P   PP WTEW    +  N +YY
Sbjct: 134 TLFAAKYRDRVLGLILVSPLCKPPTWTEWFYNKVASNLLYY 174


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,358,818
Number of Sequences: 37544
Number of extensions: 390104
Number of successful extensions: 992
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)