Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_M20
         (861 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10560| Best HMM Match : No HMM Matches (HMM E-Value=.)              96   4e-20
SB_16876| Best HMM Match : Hydrolase (HMM E-Value=1.8e-06)             92   6e-19
SB_32744| Best HMM Match : Sulfatase (HMM E-Value=0)                   92   6e-19
SB_50143| Best HMM Match : No HMM Matches (HMM E-Value=.)              45   9e-05
SB_4812| Best HMM Match : Sulfatase (HMM E-Value=0)                    41   0.001
SB_2379| Best HMM Match : Sulfatase (HMM E-Value=0.00017)              38   0.010
SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.014
SB_35679| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.018
SB_38453| Best HMM Match : Sulfatase (HMM E-Value=3.1e-06)             36   0.056
SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05)              33   0.39 
SB_43688| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.6  
SB_40532| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.8  
SB_27917| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.9  

>SB_10560| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 721

 Score = 95.9 bits (228), Expect = 4e-20
 Identities = 46/89 (51%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
 Frame = +3

Query: 201 KRPNFVLILTDDQDVVLGGMDPMTNVQRFIGKEGITFTNSYVTSPICCPSRASLLTGMYV 380
           ++PN + I+TDDQD  LG MD M N  R I K G  F N++VTSPICCPSR+S+LTGMY 
Sbjct: 96  RKPNIIFIMTDDQDTELGSMDVM-NKTREIFKGGTHFVNAFVTSPICCPSRSSILTGMYA 154

Query: 381 HNHKTVNNSLHGGCYGENWKY-HEKQTFA 464
           HNH  + N+++  C   +W+   EK+ FA
Sbjct: 155 HNHNVLTNNVN--CSSLSWRRGPEKRNFA 181



 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 24/66 (36%), Positives = 31/66 (46%)
 Frame = +1

Query: 499 YAGKYLNQYGTKEAGGPXVVPPGWTEWRGLVGNSVYYNYTLSNNGVPTFSTDSYLTDVIR 678
           Y GKYLN Y          +P GW  W GL+ NS +YNY L +N       ++Y  D   
Sbjct: 241 YFGKYLNAYDGS------YIPYGWHRWAGLIRNSRFYNYVLRHNTFYKKHQNNYENDYFT 294

Query: 679 XLGVSY 696
            L  +Y
Sbjct: 295 NLDKNY 300


>SB_16876| Best HMM Match : Hydrolase (HMM E-Value=1.8e-06)
          Length = 595

 Score = 91.9 bits (218), Expect = 6e-19
 Identities = 43/81 (53%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
 Frame = +1

Query: 469 YFXEAGYDTFYAGKYLNQYGTKEAGGPXVVPPGWTEWRGLVGNSVYYNYTLSNNGVPTFS 648
           Y  E GY T+YAGKYLN+YG    GG   VPPGW  W GLVGNS YYNYT+S NG     
Sbjct: 404 YLKELGYKTYYAGKYLNKYGMSATGGTQYVPPGWDSWLGLVGNSKYYNYTVSVNGKAEKH 463

Query: 649 ----TDSYLTDVIRXLGVSYI 699
                + Y TDVI    VS++
Sbjct: 464 GGDYKEDYFTDVITRSAVSFL 484



 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 48/90 (53%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
 Frame = +3

Query: 210 NFVLILTDDQDVVLGGMDPMTNVQRFIGKEGITFTNSYVTSPICCPSRASLLTGMYVHNH 389
           N VL+LTDDQD VLG M                    +V SP+CCPSRAS+LTGMYVHNH
Sbjct: 337 NIVLVLTDDQDQVLGSM--------------------FVASPLCCPSRASILTGMYVHNH 376

Query: 390 KTVNNSLHGGCYGENWKY-HEKQTFATILQ 476
           KT+NNS++G C  +NW+   EKQTF T L+
Sbjct: 377 KTLNNSVNGNCASKNWQQGPEKQTFNTYLK 406


>SB_32744| Best HMM Match : Sulfatase (HMM E-Value=0)
          Length = 485

 Score = 91.9 bits (218), Expect = 6e-19
 Identities = 43/81 (53%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
 Frame = +1

Query: 469 YFXEAGYDTFYAGKYLNQYGTKEAGGPXVVPPGWTEWRGLVGNSVYYNYTLSNNGVPTFS 648
           Y  E GY T+YAGKYLN+YG    GG   VPPGW  W GLVGNS YYNYT+S NG     
Sbjct: 101 YLKELGYKTYYAGKYLNKYGMSATGGTQYVPPGWDSWLGLVGNSKYYNYTVSVNGKAEKH 160

Query: 649 ----TDSYLTDVIRXLGVSYI 699
                + Y TDVI    VS++
Sbjct: 161 GGDYKEDYFTDVITRSAVSFL 181



 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 48/90 (53%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
 Frame = +3

Query: 210 NFVLILTDDQDVVLGGMDPMTNVQRFIGKEGITFTNSYVTSPICCPSRASLLTGMYVHNH 389
           N VL+LTDDQD VLG M                    +V SP+CCPSRAS+LTGMYVHNH
Sbjct: 34  NIVLVLTDDQDQVLGSM--------------------FVASPLCCPSRASILTGMYVHNH 73

Query: 390 KTVNNSLHGGCYGENWKY-HEKQTFATILQ 476
           KT+NNS++G C  +NW+   EKQTF T L+
Sbjct: 74  KTLNNSVNGNCASKNWQQGPEKQTFNTYLK 103


>SB_50143| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 91

 Score = 44.8 bits (101), Expect = 9e-05
 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
 Frame = +3

Query: 201 KRPNFVLILTDD---QDVVLGGMDPM-TNVQRFIGKEGITFTNSYVTSPICCPSRASLLT 368
           K+P+ ++I+ DD    DV   G   + T    F    G+   N YV SP+C PSRAS++T
Sbjct: 25  KKPHIIIIVADDLGWDDVSFHGSPQIPTPYIDFYANRGVILNNYYV-SPMCTPSRASMMT 83

Query: 369 GMYVHN 386
           G Y  N
Sbjct: 84  GKYPIN 89


>SB_4812| Best HMM Match : Sulfatase (HMM E-Value=0)
          Length = 1040

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
 Frame = +3

Query: 201 KRPNFVLILTDD---QDVVLGGMDPMTNVQ-RFIGKEGITFTNSYVTSPICCPSRASLLT 368
           +RPN V++L DD    D+   G D +       + +EG    ++   +PIC PSRA+ +T
Sbjct: 28  QRPNIVILLVDDLGIADIGCFGNDTIRTPHIDKLAREGAALRHNLSPAPICTPSRAAFMT 87

Query: 369 GMY 377
           G Y
Sbjct: 88  GRY 90



 Score = 39.1 bits (87), Expect = 0.005
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
 Frame = +3

Query: 201 KRPNFVLILTDD---QDVVLGGMDPMTNVQ-RFIGKEGITFTNSYVTSPICCPSRASLLT 368
           K+PN ++ + DD    D+   G D +       I  EG   T++     IC PSRA+LLT
Sbjct: 479 KKPNILIFIVDDLGYADLGCFGNDSLATPHIDKIATEGAKLTHNLAGESICTPSRAALLT 538

Query: 369 GMY 377
           G Y
Sbjct: 539 GRY 541


>SB_2379| Best HMM Match : Sulfatase (HMM E-Value=0.00017)
          Length = 301

 Score = 37.9 bits (84), Expect = 0.010
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = +3

Query: 288 IGKEGITFTNSYVTSPICCPSRASLLTGMYVHN 386
           +  EG+   NSY  SPIC P+RASL+TG +  N
Sbjct: 125 LASEGVIL-NSYYVSPICTPTRASLMTGKHPMN 156


>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1240

 Score = 37.5 bits (83), Expect = 0.014
 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
 Frame = +3

Query: 201 KRPNFVLILTDD---QDVVLGGMD--PMTNVQRFIGKEGITFTNSYVTSPICCPSRASLL 365
           K P+ ++++ DD    D+   G    P  N+   +   G+   N YV SP+  PSRAS +
Sbjct: 148 KPPHIIMVVADDLGWDDISFHGSPQIPTPNLDA-LANSGVILNNYYV-SPMDTPSRASFM 205

Query: 366 TGMY-VH---NHKTVNN 404
           TG Y +H    H T++N
Sbjct: 206 TGKYPIHMGVQHDTLHN 222


>SB_35679| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 86

 Score = 37.1 bits (82), Expect = 0.018
 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
 Frame = +3

Query: 201 KRPNFVLILTDD---QDVVLGGMDPMT--NVQRFIGKEGITFTNSYVTSPICCPSRASLL 365
           K P+ V I  DD    DV    +  +   N+ R  G EG+   N YV  PIC P+R + L
Sbjct: 20  KPPHIVFIFVDDLGWSDVGYHNITDLKTPNIDRLAG-EGVVLENYYV-QPICTPARGTFL 77

Query: 366 TGMY 377
           +G Y
Sbjct: 78  SGRY 81


>SB_38453| Best HMM Match : Sulfatase (HMM E-Value=3.1e-06)
          Length = 473

 Score = 35.5 bits (78), Expect = 0.056
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
 Frame = +3

Query: 201 KRPNFVLILTDD---QDVVLGGMDPMT--NVQRFIGKEGITFTNSYVTSPICCPSRASLL 365
           K P+ +L++ DD    DV    +  +   N+ R +  +G    N YV  PIC P+R++LL
Sbjct: 20  KSPHILLVVVDDLGWSDVGYHNITDLKTPNIDR-LAAQGTILENYYV-QPICSPTRSALL 77

Query: 366 TGMY-VHNHKTVNNSL 410
           +G Y +H   +V  +L
Sbjct: 78  SGRYPIHTVFSVLRAL 93


>SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05)
          Length = 492

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
 Frame = +3

Query: 201 KRPNFVLILTDD---QDVVLGGMDPMTNVQRF--IGKEGITFTNSYVTSPICCPSRASLL 365
           K P+ + IL DD    DV    +           +  +G+    SY + P+C PSR +L+
Sbjct: 9   KPPHIMFILMDDLGWSDVGYHNISHAVKTPNIDKLASQGVKLM-SYYSQPMCTPSRGALM 67

Query: 366 TGMY 377
           TG Y
Sbjct: 68  TGKY 71


>SB_43688| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1200

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
 Frame = +3

Query: 195 ELKRPNFVLILTDDQDVVLGGMDP---MTNVQRFIGKEGITFTNSYVTSPICCPSRASLL 365
           E + PN +LI+ DD    LG        T     +    + FT S     +C PSR S L
Sbjct: 741 ESRPPNVLLIIADDLRASLGCYGHRFIQTPYLDSLAVRSVRFTTSASQIAVCAPSRTSFL 800

Query: 366 T 368
           T
Sbjct: 801 T 801


>SB_40532| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 215

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +2

Query: 362 ADRHVRSQPQDREQQSSR-RMLWRELEISRETD 457
           A RH  S+PQDR++Q++R R   R+ E S+  D
Sbjct: 93  AARHKTSKPQDRDKQAARPRQASRKTETSKPQD 125


>SB_27917| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4554

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = -1

Query: 633  TVVGQSIVVVN*IPDQTAPFCPARGYHLWATSLFSTIL 520
            +V+  +++  N +PD++   CPA  +H  A  +F ++L
Sbjct: 3486 SVIIDTLIDTNILPDKSGELCPASRFHDPANEVFKSML 3523


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,001,801
Number of Sequences: 59808
Number of extensions: 444470
Number of successful extensions: 1127
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2455286845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)