Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_M20
         (861 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    99   5e-21
U53180-8|AAA96290.1|  452|Caenorhabditis elegans Sulfatase domai...    38   0.012
Z49967-12|CAI70401.1|  396|Caenorhabditis elegans Hypothetical p...    31   1.1  
Z49967-11|CAA90252.1|  442|Caenorhabditis elegans Hypothetical p...    31   1.1  
U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domai...    29   4.3  
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr...    28   7.4  

>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 98.7 bits (235), Expect = 5e-21
 Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
 Frame = +3

Query: 210 NFVLILTDDQDVVLGGMDPMTNVQRFIGKEGITFTNSYVTSPICCPSRASLLTGMYVHNH 389
           N +LILTDDQD+ LG MD M    + + + G  FT+ YVT+PICCPSR+++LTG+YVHNH
Sbjct: 36  NVILILTDDQDIELGSMDFMPKTSQIMKERGTEFTSGYVTTPICCPSRSTILTGLYVHNH 95

Query: 390 KTVNNSLHGGCYGENW-KYHEKQTFATILQ 476
               N+ +  C G  W K HEK++    LQ
Sbjct: 96  HVHTNNQN--CTGVEWRKVHEKKSIGVYLQ 123



 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
 Frame = +1

Query: 466 LYFXEAGYDTFYAGKYLNQYGTKEAGGPXVVPPGWTEWRGLVGNSVYYNYTLSNNGV-PT 642
           +Y  EAGY T Y GKYLN+Y          +PPGW EW  +V NS +YNYT+++NG    
Sbjct: 120 VYLQEAGYRTAYLGKYLNEYDGS------YIPPGWDEWHAIVKNSKFYNYTMNSNGEREK 173

Query: 643 FSTD---SYLTDVIRXLGVSYIXNXTEIEA 723
           F ++    Y TD++    + +I    +I A
Sbjct: 174 FGSEYEKDYFTDLVTNRSLKFIDKHIKIRA 203


>U53180-8|AAA96290.1|  452|Caenorhabditis elegans Sulfatase domain
           protein protein 2 protein.
          Length = 452

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
 Frame = +3

Query: 201 KRPNFVLILTDDQ---DVVLGG--MDPMTNVQRFIGKEGITFTNSYVTSPICCPSRASLL 365
           + PN V+++ DD    D+   G      T V R +  EG  FT +Y    +C PSRA  +
Sbjct: 31  RHPNIVILMIDDLGYGDIASYGHPTQEYTQVDR-MAAEGTRFTQAYSADSMCSPSRAGFI 89

Query: 366 TG 371
           TG
Sbjct: 90  TG 91


>Z49967-12|CAI70401.1|  396|Caenorhabditis elegans Hypothetical
           protein F54C9.6b protein.
          Length = 396

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +3

Query: 207 PNFVLILTDDQDVVLGGMDPMTNVQRFIGKEGITFTN--SYVTSPICCPSRASLLTGMYV 380
           PN V+IL D     +   DPM+N   + G   +TF+   + +    C   R + +T  YV
Sbjct: 249 PNSVVILEDIDAAFVSREDPMSNHPAYQGLSRVTFSGLLNALDGVACAEERLTFMTTNYV 308


>Z49967-11|CAA90252.1|  442|Caenorhabditis elegans Hypothetical
           protein F54C9.6a protein.
          Length = 442

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +3

Query: 207 PNFVLILTDDQDVVLGGMDPMTNVQRFIGKEGITFTN--SYVTSPICCPSRASLLTGMYV 380
           PN V+IL D     +   DPM+N   + G   +TF+   + +    C   R + +T  YV
Sbjct: 295 PNSVVILEDIDAAFVSREDPMSNHPAYQGLSRVTFSGLLNALDGVACAEERLTFMTTNYV 354


>U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domain
           protein protein3, isoform a protein.
          Length = 488

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = +3

Query: 201 KRPNFVLILTDD---QDVVLGGMDPMTNVQRFIG--KEGITFTNSYVTSPICCPSRASLL 365
           ++PN + I+ DD    DV        T   R +   K     +NSYV   +C P+R++ +
Sbjct: 29  QKPNVLFIMADDLGFSDVDWKDSTLHTPNLRHLAFHKNTALLSNSYVNQ-LCTPTRSAFM 87

Query: 366 TGMYVHNHKTVN 401
           TG Y     T N
Sbjct: 88  TGYYPFRVGTQN 99


>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
           protein W05B2.2 protein.
          Length = 1278

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 261 DPMTNVQRFIGKEGITFTNSYVTSPICCPSRAS 359
           DP  NVQR  GKE    T+    + +CCP  A+
Sbjct: 368 DPSDNVQRCSGKEHCPETHD-CKNTVCCPKPAA 399


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,954,895
Number of Sequences: 27780
Number of extensions: 329549
Number of successful extensions: 828
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)