Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_M19
         (1234 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747           29   7.5  
01_05_0480 - 22606976-22606991,22607721-22607833                       29   7.5  

>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
          Length = 368

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +2

Query: 539 GGGGXXXFPPXKKKXGGXXXPPXFXXXXKXXGGGGXP 649
           GGGG    PP     GG           K  GGGG P
Sbjct: 135 GGGGGGSVPPENDDHGGSCDEASDDEGNKQGGGGGSP 171


>01_05_0480 - 22606976-22606991,22607721-22607833
          Length = 42

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 594 PPPXXFXXXKXKXGGGGXPPPP 659
           PPP  F   +   GGGG PP P
Sbjct: 13  PPPLLFSRGRRTTGGGGCPPIP 34


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,275,402
Number of Sequences: 37544
Number of extensions: 459715
Number of successful extensions: 749
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3794526552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)