BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_M18
(1055 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0CS42 Cluster: Chromosome undetermined scaffold_26, wh... 37 1.0
UniRef50_Q0D4Y8 Cluster: Os07g0596300 protein; n=7; Eukaryota|Re... 36 1.3
UniRef50_A0R2X6 Cluster: Putative uncharacterized protein; n=2; ... 36 2.3
UniRef50_Q9VY31 Cluster: CG9411-PA; n=2; Sophophora|Rep: CG9411-... 35 3.1
UniRef50_Q9SN46 Cluster: Extensin-like protein; n=4; Magnoliophy... 35 4.1
UniRef50_Q01HL2 Cluster: H0211F06-OSIGBa0153M17.6 protein; n=12;... 35 4.1
UniRef50_Q852P0 Cluster: Pherophorin; n=2; Eukaryota|Rep: Pherop... 34 7.1
UniRef50_Q010M7 Cluster: Predicted membrane protein; n=3; Eukary... 34 7.1
UniRef50_A7RW05 Cluster: Predicted protein; n=1; Nematostella ve... 34 7.1
UniRef50_A4T9C9 Cluster: Integral membrane protein-like protein;... 33 9.4
>UniRef50_A0CS42 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_26,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 417
Score = 36.7 bits (81), Expect = 1.0
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +1
Query: 268 IXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRGXXXPPP 408
+ PPP S+ G PP PP + PPPRG PPP
Sbjct: 269 VVPPPPAPSAKGGAPPPPPPPPPPPPPPPPPPKGVPPPPRGPPPPPP 315
>UniRef50_Q0D4Y8 Cluster: Os07g0596300 protein; n=7; Eukaryota|Rep:
Os07g0596300 protein - Oryza sativa subsp. japonica
(Rice)
Length = 754
Score = 36.3 bits (80), Expect = 1.3
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Frame = +1
Query: 265 GIXXPPPQISSXGXXPPXF---FXKXXSXXPPXKKXGXLSPPPRGXXXPPPXG 414
G PPP + G PP + PP G PPPRG PPP G
Sbjct: 242 GAPPPPPPPGAGGRAPPPPPAPGGRLGGPPPPPPPGGRAPPPPRGPGAPPPPG 294
>UniRef50_A0R2X6 Cluster: Putative uncharacterized protein; n=2;
Mycobacterium|Rep: Putative uncharacterized protein -
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Length = 377
Score = 35.5 bits (78), Expect = 2.3
Identities = 21/69 (30%), Positives = 23/69 (33%)
Frame = +1
Query: 208 NPPXPXXHKFGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPR 387
NPP P + G PPP P F PP G PPP+
Sbjct: 9 NPPPPDGG-YPPPPPPDGGYPPPPPPDGGYPPAQPGGFGPPPQGGYPPPPPPGGYPPPPQ 67
Query: 388 GXXXPPPXG 414
G PPP G
Sbjct: 68 GGFPPPPPG 76
>UniRef50_Q9VY31 Cluster: CG9411-PA; n=2; Sophophora|Rep: CG9411-PA
- Drosophila melanogaster (Fruit fly)
Length = 993
Score = 35.1 bits (77), Expect = 3.1
Identities = 19/66 (28%), Positives = 20/66 (30%)
Frame = +1
Query: 211 PPXPXXHKFGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRG 390
PP P +G G PPP S PP PP G PP
Sbjct: 436 PPPPPSGNYGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPPSGN 495
Query: 391 XXXPPP 408
PPP
Sbjct: 496 YGPPPP 501
>UniRef50_Q9SN46 Cluster: Extensin-like protein; n=4;
Magnoliophyta|Rep: Extensin-like protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 839
Score = 34.7 bits (76), Expect = 4.1
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +2
Query: 908 PNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P H+PP + PP P PP SP + PPP P
Sbjct: 737 PPPTPIHSPPPQSHPPCIEYSPPPPPTVHYNPPPPP-SPAHYSPPPSP 783
>UniRef50_Q01HL2 Cluster: H0211F06-OSIGBa0153M17.6 protein; n=12;
Magnoliophyta|Rep: H0211F06-OSIGBa0153M17.6 protein -
Oryza sativa (Rice)
Length = 1510
Score = 34.7 bits (76), Expect = 4.1
Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Frame = +1
Query: 211 PPXPXXHKFGXXXKKTXGGIXXPPPQISSXG--XXPPXFFXKXXSXXPPXKKXGXLSPPP 384
PP P + G GG+ PPP G PP PP G PPP
Sbjct: 1163 PPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPTPPMPPGVPGGP-PPPP 1221
Query: 385 RGXXXPPPXG 414
G P P G
Sbjct: 1222 GGRGLPAPPG 1231
>UniRef50_Q852P0 Cluster: Pherophorin; n=2; Eukaryota|Rep: Pherophorin
- Volvox carteri f. nagariensis
Length = 606
Score = 33.9 bits (74), Expect = 7.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P+ P PP S PP P PP SP PPP P
Sbjct: 212 PPPPSPPPPPPPPPPPSPPPPPPPPPPPSPPPPPPPPPPPSPPPPPPPPSP 262
>UniRef50_Q010M7 Cluster: Predicted membrane protein; n=3;
Eukaryota|Rep: Predicted membrane protein - Ostreococcus
tauri
Length = 1449
Score = 33.9 bits (74), Expect = 7.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P+ P PP S PP P SPP SP PP P
Sbjct: 809 PPPPSPPPPPNPPTPPSPPPPPSPPPPPSSPPPPSPSPPPSPPPAPSPPPP 859
>UniRef50_A7RW05 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 994
Score = 33.9 bits (74), Expect = 7.1
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Frame = +1
Query: 211 PPXPXXHKFGXXXKKTXG-GIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPP- 384
PP P + G G G PPP G PP + PP G PPP
Sbjct: 533 PPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPG 592
Query: 385 --RGXXXPPP 408
+G PPP
Sbjct: 593 AGQGWGQPPP 602
>UniRef50_A4T9C9 Cluster: Integral membrane protein-like protein;
n=1; Mycobacterium gilvum PYR-GCK|Rep: Integral membrane
protein-like protein - Mycobacterium gilvum PYR-GCK
Length = 335
Score = 33.5 bits (73), Expect = 9.4
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +1
Query: 277 PPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRGXXXPPP 408
PPP S G PP PP G PPP G PPP
Sbjct: 19 PPPPPSEGGYPPPP---PEGGYPPPPPAGGYQQPPPGGAYPPPP 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,936,907
Number of Sequences: 1657284
Number of extensions: 8771673
Number of successful extensions: 47063
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35965
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 102062831750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -