Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_M18
(1055 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.22
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 33 0.51
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.68
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 31 1.6
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 30 3.6
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 30 3.6
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 4.8
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 4.8
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.3
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 33.9 bits (74), Expect = 0.22
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Frame = +1
Query: 211 PPXPXXHKFGXXXKKTXG-GIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPP- 384
PP P + G G G PPP G PP + PP G PPP
Sbjct: 503 PPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPG 562
Query: 385 --RGXXXPPP 408
+G PPP
Sbjct: 563 AGQGGGPPPP 572
Score = 32.3 bits (70), Expect = 0.68
Identities = 20/69 (28%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = +1
Query: 211 PPXPXXHKFGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRG 390
PP +G G PPP G PP + PP G PPP
Sbjct: 515 PPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGA 574
Query: 391 X-XXPPPXG 414
PPP G
Sbjct: 575 GQGGPPPPG 583
Score = 31.9 bits (69), Expect = 0.89
Identities = 23/85 (27%), Positives = 24/85 (28%), Gaps = 3/85 (3%)
Frame = +3
Query: 231 QIWXXXKKNPGGNXXXPPPNFXXGGXXPSLFXKKXXXFXPPXKXGXIIXPPPG---XXXT 401
Q W G PPP GG P + PP PPPG
Sbjct: 488 QGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGP 547
Query: 402 PPXGXXXXXXXXXXXXXXGXXPPPP 476
PP G G PPPP
Sbjct: 548 PPPGAGQGWGQPPPGAGQGGGPPPP 572
Score = 31.9 bits (69), Expect = 0.89
Identities = 24/90 (26%), Positives = 25/90 (27%), Gaps = 2/90 (2%)
Frame = +3
Query: 210 PPLXRXPQIWXXXKKNPGGNXXXPPPNFXXGGXXPSLFXKKXXXFXPPXKXGXIIXPPP- 386
PP Q W G PPP GG P + PP PPP
Sbjct: 514 PPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPG 573
Query: 387 -GXXXTPPXGXXXXXXXXXXXXXXGXXPPP 473
G PP G G PPP
Sbjct: 574 AGQGGPPPPGAGQEGPPPPGAGQGGGPPPP 603
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +1
Query: 211 PPXPXXHKFGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRG 390
PP G G PPP PP + PP G PP G
Sbjct: 526 PPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAG 585
Query: 391 XXXPPPXG 414
PPP G
Sbjct: 586 QEGPPPPG 593
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = +1
Query: 265 GIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPP---RGXXXPPP 408
G PPP G PP + PP G PPP +G PPP
Sbjct: 489 GWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPP 539
Score = 30.3 bits (65), Expect = 2.7
Identities = 23/72 (31%), Positives = 24/72 (33%), Gaps = 4/72 (5%)
Frame = +1
Query: 211 PPXPXXHKFGXXXKKTXG-GIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPR 387
PP P + G G G PPP G PP PP G PPP
Sbjct: 536 PPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPP---PGAGQGGPPPPGAGQEGPPPP 592
Query: 388 G---XXXPPPXG 414
G PPP G
Sbjct: 593 GAGQGGGPPPPG 604
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 32.7 bits (71), Expect = 0.51
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +1
Query: 211 PPXPXXHKFGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRG 390
PP P G G PPP S PP PP + PP RG
Sbjct: 287 PPPPPSR--GAAPPPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRG 344
Query: 391 XXXPPPXG 414
PP G
Sbjct: 345 APPPPSMG 352
Score = 31.9 bits (69), Expect = 0.89
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 262 GGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRGXXXPPP 408
GG PPP G PP PP PPP G PPP
Sbjct: 359 GGAAPPPPPPPPVGGPPPP--PPPIEGRPPSSLGNPPPPPPPGRGAPPP 405
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +1
Query: 277 PPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRGXXXPPPXG 414
PPP + G PP S PP G PP G PP G
Sbjct: 315 PPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGG 360
Score = 29.9 bits (64), Expect = 3.6
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +1
Query: 211 PPXPXXHKFGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRG 390
PP P G PPP S PP PP G PP G
Sbjct: 305 PPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPP----PSRGAPPPPSMGMAPPPVGG 360
Query: 391 XXXPPP 408
PPP
Sbjct: 361 AAPPPP 366
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 32.3 bits (70), Expect = 0.68
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +1
Query: 262 GGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRGXXXPPP 408
GG+ PPP ++ PP PP K PP G PPP
Sbjct: 342 GGVNPPPPPTNNPPSPPPP-TNNTPPPPPPTNKPPPPPPPTNGPPPPPP 389
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +1
Query: 277 PPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRGXXXPPPXG 414
PPP + PP S PP PPP G PPP G
Sbjct: 923 PPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGG 968
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 993 GGGXLXLPFPPXXTXPPPXPP 1055
GGG LP PP + PPP PP
Sbjct: 967 GGGAPPLPPPPGGSAPPPPPP 987
Score = 29.5 bits (63), Expect = 4.8
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +1
Query: 211 PPXPXXHKFGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRG 390
PP P G PP PP S PP L PPP G
Sbjct: 922 PPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPP--PPGGSAPPPGGGAPPLPPPPGG 979
Query: 391 XXXPPP 408
PPP
Sbjct: 980 SAPPPP 985
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P P +TP S F PP P PP P PPP P
Sbjct: 280 PPPPPPPPSNTPGMFASSG---FQPPPPPPTDFAPPPPPPEPTSELPPPPP 327
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 29.9 bits (64), Expect = 3.6
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P P PP PP P PP +P PPP P
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P P PP PP P PP P PPP P
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P P PP PP P PP P PPP P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 28.7 bits (61), Expect = 8.3
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P P PP PP P PP P PPP P
Sbjct: 375 PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +1
Query: 262 GGIXXPPPQISSXGXXPPXFFXKXXSXXP-PXKKXGXLSPPPRGXXXPPP 408
GG PPP + G PP + P P SPPP PPP
Sbjct: 149 GGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPP 198
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.5 bits (63), Expect = 4.8
Identities = 22/73 (30%), Positives = 25/73 (34%), Gaps = 7/73 (9%)
Frame = +1
Query: 211 PPXPXXHKFGXXXKKTXGGIXXPPPQISSX---GXXPPXFFXKXXSXX----PPXKKXGX 369
PP P + G KK G PPP + P F S PP + G
Sbjct: 147 PPPPD--RGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGS 204
Query: 370 LSPPPRGXXXPPP 408
PPP PPP
Sbjct: 205 APPPPERSSGPPP 217
Score = 29.5 bits (63), Expect = 4.8
Identities = 27/75 (36%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Frame = +1
Query: 211 PPXPXXHK--FGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPP 384
PP P +K FG T G PPP S G PP PP + G PPP
Sbjct: 174 PPPPSGNKPTFGNSRTSTNG---PPPPPHSRHGSAPP----------PPERSSGPPPPPP 220
Query: 385 -RG----XXXPPPXG 414
RG PPP G
Sbjct: 221 GRGPSQRSLAPPPTG 235
Score = 28.7 bits (61), Expect = 8.3
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +1
Query: 208 NPPXPXXHKFGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPP- 384
NPP P + T G PP + + PP PP + L PPP
Sbjct: 279 NPPPPPT-RGPPSNSFTTQGPPLPPSRDQAPAPPPP--LNATPPPPPPSRDQVPLPPPPL 335
Query: 385 RGXXXPPP 408
RG PPP
Sbjct: 336 RGQIAPPP 343
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.5 bits (63), Expect = 4.8
Identities = 22/73 (30%), Positives = 25/73 (34%), Gaps = 7/73 (9%)
Frame = +1
Query: 211 PPXPXXHKFGXXXKKTXGGIXXPPPQISSX---GXXPPXFFXKXXSXX----PPXKKXGX 369
PP P + G KK G PPP + P F S PP + G
Sbjct: 59 PPPPD--RGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGS 116
Query: 370 LSPPPRGXXXPPP 408
PPP PPP
Sbjct: 117 APPPPERSSGPPP 129
Score = 29.5 bits (63), Expect = 4.8
Identities = 27/75 (36%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Frame = +1
Query: 211 PPXPXXHK--FGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPP 384
PP P +K FG T G PPP S G PP PP + G PPP
Sbjct: 86 PPPPSGNKPTFGNSRTSTNG---PPPPPHSRHGSAPP----------PPERSSGPPPPPP 132
Query: 385 -RG----XXXPPPXG 414
RG PPP G
Sbjct: 133 GRGPSQRSLAPPPTG 147
Score = 28.7 bits (61), Expect = 8.3
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +1
Query: 208 NPPXPXXHKFGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPP- 384
NPP P + T G PP + + PP PP + L PPP
Sbjct: 191 NPPPPPT-RGPPSNSFTTQGPPLPPSRDQAPAPPPP--LNATPPPPPPSRDQVPLPPPPL 247
Query: 385 RGXXXPPP 408
RG PPP
Sbjct: 248 RGQIAPPP 255
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.7 bits (61), Expect = 8.3
Identities = 15/52 (28%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXP-PPXP 1051
P P P + PP PP P +PP P + P PP P
Sbjct: 93 PYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSP 144
Score = 28.7 bits (61), Expect = 8.3
Identities = 15/51 (29%), Positives = 18/51 (35%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P P + PP PP P +PP P + PPP P
Sbjct: 123 PYPPPPNPPYPPPPNAPY------PPSPNAPYPPPPNPPYPPPLYPPPPNP 167
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,033,074
Number of Sequences: 59808
Number of extensions: 238472
Number of successful extensions: 1295
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3177781324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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