Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_M18
         (1055 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p pro...    35   0.16 
AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA...    35   0.16 
AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p pro...    30   6.1  
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA...    30   6.1  
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB...    30   6.1  
AE014296-390|AAF47594.1|  553|Drosophila melanogaster CG12361-PA...    30   6.1  
AE014298-1168|AAF46366.1|  926|Drosophila melanogaster CG10555-P...    29   8.1  

>AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p
           protein.
          Length = 993

 Score = 35.1 bits (77), Expect = 0.16
 Identities = 19/66 (28%), Positives = 20/66 (30%)
 Frame = +1

Query: 211 PPXPXXHKFGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRG 390
           PP P    +G       G    PPP  S     PP          PP    G   PP   
Sbjct: 436 PPPPPSGNYGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPPSGN 495

Query: 391 XXXPPP 408
              PPP
Sbjct: 496 YGPPPP 501


>AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA
           protein.
          Length = 993

 Score = 35.1 bits (77), Expect = 0.16
 Identities = 19/66 (28%), Positives = 20/66 (30%)
 Frame = +1

Query: 211 PPXPXXHKFGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRG 390
           PP P    +G       G    PPP  S     PP          PP    G   PP   
Sbjct: 436 PPPPPSGNYGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPPSGN 495

Query: 391 XXXPPP 408
              PPP
Sbjct: 496 YGPPPP 501


>AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p protein.
          Length = 846

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 15/51 (29%), Positives = 16/51 (31%)
 Frame = +2

Query: 899  PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
            P  P   P   PP           PP P         PP +P    PPP P
Sbjct: 174  PPPPPAPPTVEPPPPPPPAPTKVEPPPPPAPAEVEPPPPPAPTELEPPPPP 224


>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
            isoform A protein.
          Length = 1109

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 15/51 (29%), Positives = 16/51 (31%)
 Frame = +2

Query: 899  PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
            P  P   P   PP           PP P         PP +P    PPP P
Sbjct: 437  PPPPPAPPTVEPPPPPPPAPTKVEPPPPPAPAEVEPPPPPAPTELEPPPPP 487


>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
            isoform B protein.
          Length = 1150

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 15/51 (29%), Positives = 16/51 (31%)
 Frame = +2

Query: 899  PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
            P  P   P   PP           PP P         PP +P    PPP P
Sbjct: 437  PPPPPAPPTVEPPPPPPPAPTKVEPPPPPAPAEVEPPPPPAPTELEPPPPP 487


>AE014296-390|AAF47594.1|  553|Drosophila melanogaster CG12361-PA
            protein.
          Length = 553

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -1

Query: 1055 GXGXGGGGXXGGKGEXKXXPPXPP 984
            G G  GGG  GG G     PP PP
Sbjct: 157  GAGGTGGGGGGGHGHGHPTPPPPP 180



 Score = 29.5 bits (63), Expect = 8.1
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +1

Query: 985  GGXGGXXFXSPFPPXXPPPP 1044
            GG GG     P PP  PPPP
Sbjct: 164  GGGGGHGHGHPTPPPPPPPP 183


>AE014298-1168|AAF46366.1|  926|Drosophila melanogaster CG10555-PA
           protein.
          Length = 926

 Score = 29.5 bits (63), Expect = 8.1
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = +1

Query: 277 PPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRGXXXPPP 408
           PPPQ S+ G  P  +     +     +      PPP G   PPP
Sbjct: 585 PPPQNSAGGPPPMGYAGYPPNPGQYGQAGAGGGPPPSGYWPPPP 628


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,634,594
Number of Sequences: 53049
Number of extensions: 622158
Number of successful extensions: 3836
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3113
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5412930810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)