Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_M18
(1055 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 35 0.10
At5g38560.1 68418.m04662 protein kinase family protein contains ... 32 0.55
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 31 0.97
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 1.3
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 31 1.3
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 31 1.7
At4g20440.2 68417.m02983 small nuclear ribonucleoprotein associa... 31 1.7
At4g20440.1 68417.m02982 small nuclear ribonucleoprotein associa... 31 1.7
At3g15000.1 68416.m01897 expressed protein similar to DAG protei... 30 2.2
At3g11820.2 68416.m01448 syntaxin 121 (SYP121) / syntaxin-relate... 30 2.2
At3g11820.1 68416.m01449 syntaxin 121 (SYP121) / syntaxin-relate... 30 2.2
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 29 5.2
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 5.2
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 5.2
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 29 6.8
At5g26080.1 68418.m03103 proline-rich family protein contains pr... 29 6.8
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 29 6.8
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 29 6.8
At5g10550.1 68418.m01221 DNA-binding bromodomain-containing prot... 28 9.0
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 9.0
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 34.7 bits (76), Expect = 0.10
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +2
Query: 908 PNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P H+PP + PP P PP SP + PPP P
Sbjct: 737 PPPTPIHSPPPQSHPPCIEYSPPPPPTVHYNPPPPP-SPAHYSPPPSP 783
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 32.3 bits (70), Expect = 0.55
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +1
Query: 277 PPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRGXXXPPP 408
PPP +SS PP S PP SPPP PPP
Sbjct: 48 PPPVVSS-SPPPPVVSSPPPSSSPPPSPPVITSPPPTVASSPPP 90
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 31.5 bits (68), Expect = 0.97
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P P PP S F PP P P P PPP P
Sbjct: 551 PPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPPPVHSPPPPAP 601
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/51 (29%), Positives = 19/51 (37%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P + P H+PP S + P SPP +P PPP P
Sbjct: 564 PPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPP 614
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P P PP PP P PP P + PPP P
Sbjct: 466 PPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPP 516
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +2
Query: 932 PPXXXSXXXXXFXPPXPXXXXXXXXSPP-LSPXXHXPPP 1045
PP S F PP P PP SP H PPP
Sbjct: 539 PPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPP 577
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +2
Query: 920 PXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPP 1045
P T P S + PP P SPP P PPP
Sbjct: 421 PTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPP 462
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains leucine-rich
repeats, Pfam:PF00560; contains proline rich extensin
domains, INTERPRO:IPR002965
Length = 470
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P P PP PP P PP P + PPP P
Sbjct: 390 PPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPSP 440
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P P PP PP P PP P PPP P
Sbjct: 380 PPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPP 430
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P P PP PP P PP SP + PP P
Sbjct: 379 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPP 429
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/70 (28%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Frame = +1
Query: 208 NPPXPXXHKFGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPR 387
+PP P HK PPP I+ PP F+ + PP PP
Sbjct: 66 SPPPPPPHKHSPPPLSQS---LSPPPLITVIHPPPPRFYYFESTPPPPPLSPDGKGSPPS 122
Query: 388 GXXXPP-PXG 414
PP P G
Sbjct: 123 VPSSPPSPKG 132
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 268 IXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRGXXXPPP 408
I PPP S PP S PP SPPP PP
Sbjct: 41 ICSPPPSKPSPSMSPPPSPSLPLSSSPPPPPPHKHSPPPLSQSLSPP 87
>At4g20440.2 68417.m02983 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|Q05856 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Drosophila melanogaster}
Length = 257
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +1
Query: 265 GIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRGXXXPPP 408
G+ PP Q S PP + + PP PPP G PPP
Sbjct: 187 GMRPPPQQFSGP---PPPQYGQRPMIPPPGGMMRGPPPPPHGMQGPPP 231
>At4g20440.1 68417.m02982 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|Q05856 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Drosophila melanogaster}
Length = 257
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +1
Query: 265 GIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRGXXXPPP 408
G+ PP Q S PP + + PP PPP G PPP
Sbjct: 187 GMRPPPQQFSGP---PPPQYGQRPMIPPPGGMMRGPPPPPHGMQGPPP 231
>At3g15000.1 68416.m01897 expressed protein similar to DAG protein
(required for chloroplast differentiation and palisade
development) GB:Q38732 [Antirrhinum majus]
Length = 395
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/60 (28%), Positives = 19/60 (31%)
Frame = +1
Query: 211 PPXPXXHKFGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPRG 390
PP G GG PPP + PP + PP G PPP G
Sbjct: 241 PPPQRPPMGGPPPPPHIGGSAPPPPHMGGSAPPPPHM-GQNYGPPPPNNMGGPRHPPPYG 299
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/77 (27%), Positives = 24/77 (31%), Gaps = 9/77 (11%)
Frame = +1
Query: 211 PPXPXXHKFGXXXKKTXGGIXXPPP-----QISSXGXXPPXFFX----KXXSXXPPXKKX 363
PP +G GG PPP Q + G PP + PP
Sbjct: 273 PPPHMGQNYGPPPPNNMGGPRHPPPYGAPPQNNMGGPRPPQNYGGTPPPNYGGAPPANNM 332
Query: 364 GXLSPPPRGXXXPPPXG 414
G PP G PP G
Sbjct: 333 GGAPPPNYGGGPPPQYG 349
>At3g11820.2 68416.m01448 syntaxin 121 (SYP121) / syntaxin-related
protein (SYR1) contains Pfam profiles: PF00804 syntaxin
and PF05739: SNARE domain; identical to cDNA
syntaxin-related protein At-SYR1 (At-Syr1) GI:4206788,
SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
protein At-Syr1) {Arabidopsis thaliana}
Length = 315
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 1055 GXGXGGGGXXGGKGEXKXXPPXPP 984
G G GGGG GG PP PP
Sbjct: 285 GGGGGGGGTTGGSQPNSGTPPNPP 308
>At3g11820.1 68416.m01449 syntaxin 121 (SYP121) / syntaxin-related
protein (SYR1) contains Pfam profiles: PF00804 syntaxin
and PF05739: SNARE domain; identical to cDNA
syntaxin-related protein At-SYR1 (At-Syr1) GI:4206788,
SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
protein At-Syr1) {Arabidopsis thaliana}
Length = 346
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 1055 GXGXGGGGXXGGKGEXKXXPPXPP 984
G G GGGG GG PP PP
Sbjct: 316 GGGGGGGGTTGGSQPNSGTPPNPP 339
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPP 1045
P P P PP + PP P SPP SP PPP
Sbjct: 1081 PPSPPLPPSSLPPPPPAALFPPLPPP-PSQPPPPPLSPPPSPPPPPPPP 1128
>At3g19430.1 68416.m02464 late embryogenesis abundant protein-related
/ LEA protein-related similar to late embryogenesis
abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 985 GGXGGXXFXSPFPPXXPPPPXP 1050
G GG +P PP PPPP P
Sbjct: 67 GDDGGYTPPAPVPPVSPPPPTP 88
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/67 (28%), Positives = 22/67 (32%)
Frame = +1
Query: 208 NPPXPXXHKFGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLSPPPR 387
+PP P H + PPP + S PP F P SPPP
Sbjct: 566 SPPPP--HVYSPPPPVASPPPPSPPPPVHSP--PPPPVFSPPPPVFSPPPPSPVYSPPPP 621
Query: 388 GXXXPPP 408
PPP
Sbjct: 622 SHSPPPP 628
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 899 PXXPNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P P H PP S PP P P P H PPP P
Sbjct: 34 PPPPFSPPHHPPPPHFSPPHQP--PPSPYPHPHPPPPSPY-PHPHQPPPPP 81
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +2
Query: 908 PNXXPXHTPPXXXSXXXXXFXPPX--PXXXXXXXXSPPLSPXXHX--PPPXP 1051
P P PP S F PP P PP SP H PPP P
Sbjct: 19 PLPSPVPPPPSHISPPPPPFSPPHHPPPPHFSPPHQPPPSPYPHPHPPPPSP 70
>At5g26080.1 68418.m03103 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 141
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = +2
Query: 911 NXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
N P ++PP PP P PP P + PPP P
Sbjct: 35 NYQPIYSPPPPPYRSPVTIPPPPPVYSRPVAFPPP--PPIYSPPPPP 79
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 28.7 bits (61), Expect = 6.8
Identities = 21/71 (29%), Positives = 24/71 (33%)
Frame = +1
Query: 196 KXXKNPPXPXXHKFGXXXKKTXGGIXXPPPQISSXGXXPPXFFXKXXSXXPPXKKXGXLS 375
K PP P K K + PPP I PP + K + PP
Sbjct: 43 KHPAKPPKPPTVKPPTHTPKPPT-VKPPPPYIPCP---PPPYTPKPPTVKPPPPPYVKPP 98
Query: 376 PPPRGXXXPPP 408
PPP PPP
Sbjct: 99 PPPTVKPPPPP 109
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +2
Query: 908 PNXXPXHTPPXXX-SXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPP 1045
P P H+PP S PP P P P H PPP
Sbjct: 648 PPPPPVHSPPPPVFSPPPPMHSPPPPVYSPPPPVHSPPPPPVHSPPP 694
>At5g10550.1 68418.m01221 DNA-binding bromodomain-containing protein
low similarity to kinase [Gallus gallus] GI:1370092;
contains Pfam profile PF00439: Bromodomain
Length = 678
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 971 PPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
PP P SPP SP PPP P
Sbjct: 410 PPPPVIEITRDPSPPPSPVQPPPPPSP 436
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +2
Query: 908 PNXXPXHTPPXXXSXXXXXFXPPXPXXXXXXXXSPPLSPXXHXPPPXP 1051
P P H+PP P SPP P + PPP P
Sbjct: 493 PPPPPVHSPPPPSPIHSPPPPPVYSPPPPPPVYSPPPPPPVYSPPPPP 540
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,761,124
Number of Sequences: 28952
Number of extensions: 256497
Number of successful extensions: 2111
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 12,070,560
effective HSP length: 82
effective length of database: 9,696,496
effective search space used: 2608357424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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