Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_M17
         (899 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   0.81 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.4  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    24   1.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.9  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -1

Query: 638 LVYIW---RAFPRFLRQLFVCRTR*CYEYNN 555
           LVY++     F  FLRQ+F CR   C +Y N
Sbjct: 157 LVYVYCCDNNFNVFLRQVFTCR---CKDYKN 184


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
 Frame = +2

Query: 530 FKKNDL-TFNYYIHNTTESYKRKVVEEI---EEMLAKYKLTDAY 649
           FK+  L  FNYY+   T  YKR+    +    E  AK K T  Y
Sbjct: 70  FKEASLYCFNYYVIVVTTFYKRRTWTRLLKNLESCAKIKKTKRY 113


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +3

Query: 684 LKNAKEKDSAIWSTIRILYF 743
           LKNA+ K++A+W  +R  ++
Sbjct: 130 LKNARVKNTALWKQLRYEHY 149


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 608 IEEMLAKYKLTDAYEELDKIIDLKH 682
           IEE ++KYK  +    L K  DL H
Sbjct: 196 IEESISKYKHAELVMPLCKSCDLHH 220


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = +3

Query: 534 KKMTSPLIIIFITLPSPTNEKLSKKSRKCSPNIN 635
           +++ + ++ +   LPSP +++ S  S +   N+N
Sbjct: 396 QQVEAAIVHLIANLPSPGSDQRSTPSPRVYGNVN 429


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,463
Number of Sequences: 336
Number of extensions: 4601
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)