Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_M14
         (887 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    25   0.79 
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   7.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.8  

>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
 Frame = +2

Query: 149 DVALRAYAGCLXPGPRFAGPEVTELKTEVVSVPEG----CTTKSKHGDMLTMHY--TGTL 310
           D  L+ Y  CL        P+  ELK  +          CT K K G    +HY      
Sbjct: 40  DRLLKNYFNCLMERGT-CSPDGEELKKALPDALHSGCSKCTEKQKEGSRKIIHYLIDNKR 98

Query: 311 DDGHKFDSSYDRD 349
           D  ++ ++ YD+D
Sbjct: 99  DWWNELEAKYDKD 111


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 284 LTMHYTGTLDDGHKFDSSYD 343
           L +HY  + D  HK+ + YD
Sbjct: 12  LFVHYGWSEDTTHKYTTKYD 31


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 433 FLTNA-HVKQALVPSLDHLPNANLERKRLIAIITR 332
           +L+ A +V Q  VP+ D+LP   LE    I + T+
Sbjct: 450 YLSKARYVIQTWVPASDNLPTLLLELGYRIIVSTK 484


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 203 GPEVTELKTEVVSVPEGCT 259
           GP++TEL+ E +   +  T
Sbjct: 282 GPQITELEPETIESQDAIT 300


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 203 GPEVTELKTEVVSVPEGCT 259
           GP++TEL+ E +   +  T
Sbjct: 515 GPQITELEPETIESQDAIT 533


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 203 GPEVTELKTEVVSVPEGCT 259
           GP++TEL+ E +   +  T
Sbjct: 515 GPQITELEPETIESQDAIT 533


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,547
Number of Sequences: 336
Number of extensions: 3499
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)