Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_M13
         (1284 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794...    33   0.64 
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093...    27   1.1  
01_03_0005 + 11568545-11569119,11569179-11569191                       31   1.5  
07_01_0974 + 8211602-8212051                                           30   3.4  
10_08_0161 + 15312986-15313160,15313250-15313557,15313676-153137...    30   4.5  
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747           30   4.5  
07_03_1136 + 24218601-24218734,24218769-24219906                       29   6.0  
03_05_0067 - 20460206-20460703,20461255-20461530                       29   6.0  

>11_02_0065 -
           7938007-7938393,7939292-7939435,7940597-7940665,
           7940762-7940809,7941488-7941584,7941688-7941767,
           7941841-7941912,7942256-7942350,7943903-7943984,
           7945176-7945209,7945255-7945262,7945657-7946058
          Length = 505

 Score = 32.7 bits (71), Expect = 0.64
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +1

Query: 913 AXPPPPPXXFFXFXXPPPP 969
           A PPPPP  FF    PPPP
Sbjct: 65  AAPPPPPAAFFAAVPPPPP 83


>01_06_1670 -
           39007402-39008229,39008320-39008567,39009159-39009364,
           39009454-39011054
          Length = 960

 Score = 27.5 bits (58), Expect(2) = 1.1
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 915 PXPPPXXXFFXFXXPPPPP 971
           P PPP   F     PPPPP
Sbjct: 355 PAPPPPPPFAPTLPPPPPP 373



 Score = 23.0 bits (47), Expect(2) = 1.1
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +3

Query: 948 FXXPPPPPTXXXG 986
           F  PPPPPT   G
Sbjct: 409 FVQPPPPPTHTHG 421


>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 19/68 (27%), Positives = 19/68 (27%)
 Frame = +1

Query: 919  PPPPPXXFFXFXXPPPPQXXXXXGXXXXXXXXXXXXPXPPXXXXGXXFXXFXXXXLXXXX 1098
            PPPPP        PPPP      G            P PP    G               
Sbjct: 57   PPPPPVVTPTPQCPPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPP 116

Query: 1099 XXXGGGGG 1122
               GGGGG
Sbjct: 117  TGGGGGGG 124


>07_01_0974 + 8211602-8212051
          Length = 149

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 22/74 (29%), Positives = 24/74 (32%), Gaps = 6/74 (8%)
 Frame = +3

Query: 921  PPPXXXFFXFXXPPPPPTXXXGRGXXXXPXXXFXXXXPPXXXXRXXXXXFXXXXPXXP-- 1094
            PPP    F +  PPPP +   G G             PP               P  P  
Sbjct: 37   PPPLVQQFYYYSPPPPSSPVGGGGTGGGGPSPPTNPAPPAVPCNCGTTT-APAAPSPPGV 95

Query: 1095 ----APXXGGGGGG 1124
                AP  GGGGGG
Sbjct: 96   YNYSAPSGGGGGGG 109


>10_08_0161 +
           15312986-15313160,15313250-15313557,15313676-15313754,
           15313856-15314373
          Length = 359

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -2

Query: 968 GGGGXXKXKKXXGGGGG 918
           GGGG  K KK  GGGGG
Sbjct: 243 GGGGDKKDKKEGGGGGG 259


>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
          Length = 368

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -2

Query: 968 GGGGXXKXKKXXGGGGG 918
           GGGG  K KK  GGGGG
Sbjct: 215 GGGGKKKGKKGGGGGGG 231


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 16/45 (35%), Positives = 16/45 (35%)
 Frame = -1

Query: 1047 PXXGGGGXXXXXXXGXXXXPXXXXXLGGGGXXKXKKXXXXGGGXG 913
            P  GGGG       G    P      GGGG    K     GGG G
Sbjct: 199  PGGGGGGGGLGGGGGEGGAPERVIGGGGGGGGALKCVVGGGGGGG 243


>03_05_0067 - 20460206-20460703,20461255-20461530
          Length = 257

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +1

Query: 919 PPPPPXXFFXFXXPPPPQ 972
           PPPPP  F     PPPPQ
Sbjct: 14  PPPPPQYFQAGPPPPPPQ 31


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,501,519
Number of Sequences: 37544
Number of extensions: 724409
Number of successful extensions: 7862
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7016
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3992400636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)