Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_M11
         (994 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.29 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.50 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   2.0  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   2.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.7 bits (61), Expect = 0.29
 Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = +1

Query: 655 QNPXXPPPGPP-XXPPXPXKGXXXGG 729
           Q P  PPP PP   PP P  G   GG
Sbjct: 580 QPPPAPPPPPPMGPPPSPLAGGPLGG 605



 Score = 24.6 bits (51), Expect = 4.6
 Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
 Frame = +1

Query: 643 GSPXQNPXXPPPGPPXXPP-XPXKGXXXGG 729
           G P      PPP PP  PP  P      GG
Sbjct: 572 GFPNLPNAQPPPAPPPPPPMGPPPSPLAGG 601



 Score = 24.6 bits (51), Expect = 4.6
 Identities = 11/29 (37%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
 Frame = -1

Query: 748 PXVXXPXPPXXPPXXG-GGGXXGAPGGXK 665
           P    P PP  PP     GG  G P G +
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLGGPAGSR 610


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.50
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = +1

Query: 550 KPXPPXXXGGGXGXPPPXGGGXXXXXXXTGGG 645
           K   P   GGG G   P GGG        GGG
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGG 227



 Score = 27.5 bits (58), Expect = 0.66
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = +2

Query: 548 KNXXPXXXGGGGXGXPPPXGGGFXXXPXTLGG 643
           K   P   GGG  G  P  GGG    P   GG
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGG 227



 Score = 25.4 bits (53), Expect = 2.7
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -3

Query: 758 GGGAXCXKXPPPXXXPFXGXGGXXGGPGGGXXG 660
           GGG+      P    P  G     GG GGG  G
Sbjct: 144 GGGSGAIHASPNAQNPSSGGRSSSGGGGGGGGG 176



 Score = 23.8 bits (49), Expect = 8.1
 Identities = 17/57 (29%), Positives = 17/57 (29%)
 Frame = -2

Query: 762 GGGGGXXXKXPXPPXXPLXXXGGXXXGPRGGXXGILRXGAPPSVXGXXXXPPPXGGG 592
           GGGGG            L           G   G    GAP    G    P P GGG
Sbjct: 172 GGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGGG 228


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
 Frame = -3

Query: 824 GGGGRPPXXXGGGVFVSXFXXGGGGAXCXKXPPPXXXPFX-GXGGXXGGPGGGXXG 660
           GGGG       G   V      GGG+   +           G GG  GG GGG  G
Sbjct: 517 GGGGGGSGCVNGSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAG 572



 Score = 24.2 bits (50), Expect = 6.1
 Identities = 18/58 (31%), Positives = 20/58 (34%)
 Frame = -3

Query: 821 GGGRPPXXXGGGVFVSXFXXGGGGAXCXKXPPPXXXPFXGXGGXXGGPGGGXXGFCXG 648
           GGG      GGG  ++       GA       P      G GG   G GGG  G   G
Sbjct: 815 GGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSG-GGGSGGTSGG 871



 Score = 23.8 bits (49), Expect = 8.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 703 GGGGXXGAPGGXKXDFAXGSP 641
           G GG  G+ GG     A GSP
Sbjct: 681 GAGGGAGSSGGSGGGLASGSP 701


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
 Frame = -2

Query: 726 PPXXPLXXXGGXXX--GPRGGXXGILRXGAPPSVXGXXXXPPPXGGGXPXPPP 574
           PP  P    GG      P+      L  G P  + G    P P  GG P  PP
Sbjct: 264 PPIRPPNPMGGPRPQISPQNSN---LSGGMPSGMVGPPRPPMPMQGGAPGGPP 313



 Score = 25.4 bits (53), Expect = 2.7
 Identities = 18/58 (31%), Positives = 18/58 (31%)
 Frame = +1

Query: 553 PXPPXXXGGGXGXPPPXGGGXXXXXXXTGGGSPXQNPXXPPPGPPXXPPXPXKGXXXG 726
           P P      G   PP  G          GG  P Q P  P P  P  PP    G   G
Sbjct: 187 PGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYP-QPPGVPMPMRPQMPPGAVPGMQPG 243



 Score = 24.2 bits (50), Expect = 6.1
 Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
 Frame = -3

Query: 680 PGGGXXGFCXG-EPPPVXXXXXXXPPPXGGGXPXPPPXXXGG 558
           P G   G   G +P P        PP  G   P  PP   GG
Sbjct: 233 PPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGG 274


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,225
Number of Sequences: 2352
Number of extensions: 11645
Number of successful extensions: 73
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 108941235
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)