Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_M10
(889 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 35 0.10
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_46833| Best HMM Match : MGS (HMM E-Value=1.5e-19) 31 1.2
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 5.0
SB_59209| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 28 8.8
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 28 8.8
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 34.7 bits (76), Expect = 0.10
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP + P PP P P P PPP PP
Sbjct: 375 PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Score = 34.7 bits (76), Expect = 0.10
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P PP P P P PPP PP
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P PP P P P PPP PP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPP 415
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P PP P P P PPP PP
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPP 421
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P PP P P P PPP PP
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P PP P P P PPP PP
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 33.1 bits (72), Expect = 0.31
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +3
Query: 708 GXGXPPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
G P PPP + P PP P P P PPP PP
Sbjct: 360 GINMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPP 414
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXP 869
PP PPP P PP P P P PPP P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P PP P P P PP PP
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P PP P P P PPP P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP P P P PP P P P PPP PP
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P P P P P PP PP
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP GG PPP P PP P P PPP PP
Sbjct: 945 PPPPGGNAPPPPPP-PGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPPPP 994
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.1 bits (72), Expect = 0.31
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP T+ PP P P P + PP PP
Sbjct: 358 PPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPP 408
Score = 32.7 bits (71), Expect = 0.41
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP T+ PP P P P + PP PP
Sbjct: 348 PPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPP 398
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +3
Query: 732 GGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
GG PPP T+ PP P P + PP PP
Sbjct: 342 GGVNPPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPP 388
>SB_46833| Best HMM Match : MGS (HMM E-Value=1.5e-19)
Length = 648
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -3
Query: 431 TRYAICILTRTSSNGVLLILLXRGNTVPN-*LCEVQAGHVSLRA 303
+++AICI T +S GV LI L G+T+ N + E +A + RA
Sbjct: 454 SQHAICICTGMTSEGVCLIHLHPGSTIENRVVLEYRARTIGYRA 497
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPP 863
PP PPP P PP P P P PPP
Sbjct: 167 PPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPP 214
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/54 (29%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Frame = +3
Query: 714 GXPPXXGGXXXP-PPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
G PP P PP +P PP P P P PP PP
Sbjct: 82 GHPPTNFSPNPPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPP 135
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/51 (27%), Positives = 15/51 (29%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PP +P P P P P PPP PP
Sbjct: 118 PPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPP 168
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/51 (27%), Positives = 15/51 (29%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP PP P P P + P P PP
Sbjct: 141 PPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPP 191
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Frame = +1
Query: 151 HQRNLGTSSRKS----SAPWRGREMPSSAXXXXXXXXAQLPPSRPARPSTP 291
H + LG S ++PW+ R+ S PSRP PS+P
Sbjct: 864 HMQELGADSESEEDEFASPWKRRQSKKSLSTFDRERLESTAPSRPTSPSSP 914
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/55 (29%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Frame = +3
Query: 714 GXPPXXGGXXXPPPX--THPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
G PP PPP P PP P P + PPP PP
Sbjct: 344 GAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPP 398
>SB_59209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1002
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 163 LGTSSRKSSAPWRGREMPSSAXXXXXXXXAQLPPSRPARPSTPVPITARRLT 318
LG S + ++PW P++A A +PPS + PS P T T
Sbjct: 162 LGESRNEPTSPWSPVSTPNTAGGITGQDRAPIPPS--SSPSAQPPTTTSTTT 211
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P PP P P P + P P PP
Sbjct: 57 PPAAAPAAPPPPAAAPAAPP-PPAAPPAAPPPPPPLPAPPPPPAQPAPQPP 106
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Frame = +3
Query: 714 GXPPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXP--XXXXXXXPXXSXPPPXPP 872
G PP PPP + P PP P P P PPP PP
Sbjct: 234 GHPPMGA---PPPPHSMPPPGMPPPGMMPPPGFPPMGMPGMGGMPPPGMPPPMPP 285
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 723 PXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
P GG PPP P P P PPP PP
Sbjct: 159 PATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPPPPP 208
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,219,627
Number of Sequences: 59808
Number of extensions: 316822
Number of successful extensions: 1048
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2538363813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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