Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_M10
(889 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 33 0.19
At2g27390.1 68415.m03306 proline-rich family protein contains pr... 33 0.25
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 33 0.33
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 32 0.58
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 31 1.0
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 31 1.0
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 31 1.4
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 31 1.4
At1g26150.1 68414.m03192 protein kinase family protein similar t... 31 1.4
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 29 3.1
At3g09000.1 68416.m01053 proline-rich family protein 29 3.1
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 29 5.4
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 29 5.4
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 29 5.4
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 5.4
At5g67600.1 68418.m08524 expressed protein 28 7.2
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 28 7.2
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 28 7.2
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 28 7.2
At3g62180.1 68416.m06986 invertase/pectin methylesterase inhibit... 28 7.2
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 28 7.2
At1g80070.1 68414.m09373 splicing factor, putative strong simila... 28 7.2
At1g10620.1 68414.m01204 protein kinase family protein contains ... 28 7.2
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 9.5
At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family... 28 9.5
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P PP P P P PPP PP
Sbjct: 381 PPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPP 431
Score = 31.9 bits (69), Expect = 0.58
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 747 PPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PPP P PP P P P PPP PP
Sbjct: 380 PPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPP 421
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXP---PPXPP 872
PP PPP +P PP P P P S P PP PP
Sbjct: 396 PPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPSPPYVYPPPPP 449
>At2g27390.1 68415.m03306 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXP-PPXPP 872
PP G PPP P PP P P P P PP PP
Sbjct: 20 PPGTTGTCCPPPLVFPLLPLSPPPSPPPSPSSPPRLPPPFPALFPPEPPLPP 71
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 299 MGTGVLGLAGRDGGSCAYRRHRRTRADD 216
MGT V G GR GGS ++RHR TR DD
Sbjct: 265 MGTRV-GRDGRRGGSRPHKRHRFTRTDD 291
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P PP P P P S PPP PP
Sbjct: 445 PPPVYSPPPPPPPPPPPPVYSPP--PPPPPPPPPPPVYSPPPPSPPPPPPP 493
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 747 PPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PPP + P PP P P P S PPP P
Sbjct: 540 PPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSP 581
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXX--SXPPPXPP 872
PP PPP P PP P P P S PPP PP
Sbjct: 451 PPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPP 503
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXP 869
PP PPP P PP P P P PPP P
Sbjct: 467 PPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPP 516
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P P P P P PPP PP
Sbjct: 457 PPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPP 507
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXP 869
PP P P P PP P P P S PPP P
Sbjct: 476 PPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPP 525
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P PP P P P PPP PP
Sbjct: 461 PPVYSPPPPPPPPPPPPPVYSPP---PPSPPPPPPPVYSPPPPPPPPPPPP 508
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PP T P PP P P PPP PP
Sbjct: 411 PPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPP 461
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +3
Query: 747 PPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PPP + PP P P S PPP PP
Sbjct: 431 PPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPP 472
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P PP P P P PPP PP
Sbjct: 432 PPPVYSPPPPPPPPPPVYSPPPPPPPP----PPPPVYSPPPPPPPPPPPPP 478
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/51 (27%), Positives = 15/51 (29%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP + PP P P P PP PP
Sbjct: 466 PPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPP 516
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXP 869
PP PPP P PP P P P P P P
Sbjct: 482 PPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTP 531
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/51 (27%), Positives = 15/51 (29%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P PP P + PPP PP
Sbjct: 492 PPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPP 542
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = +3
Query: 747 PPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXP-XXSXPPPXP 869
PPP + P PP P P P S PPP P
Sbjct: 564 PPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTP 605
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 747 PPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PPP P PP P P P S PP PP
Sbjct: 65 PPPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPPATPP 106
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 747 PPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PPP P PP P P P S PP PP
Sbjct: 65 PPPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPPATPP 106
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP +HP P P P P PPP PP
Sbjct: 736 PPPPTPIHSPPPQSHPPCIEYSPPPPPTVHYNP--PPPPSPAHYSPPPSPP 784
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP P PP P P P PPP PP
Sbjct: 579 PPPLPSRSIPPPLAQP----PPPRPPPPPPPPPSSRSIPSPSAPPPPPPPP 625
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP P + P PP P P P S PPP PP
Sbjct: 573 PPPPPPPPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPPPPPP 623
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +3
Query: 747 PPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PPP P PP P P PPP PP
Sbjct: 646 PPPTRIPAAKCAPPPPPPPPTSHSGSIRVGPPSTPPPPPPPP 687
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +3
Query: 747 PPPXT---HPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PPP T P PP P P P S PPP PP
Sbjct: 85 PPPTTIPVSPPPEPSPPPPLPTEAPPPANPVSSPPPESSPPPPPP 129
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +3
Query: 747 PPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PPP H PP P P PPP PP
Sbjct: 695 PPPMQHSTVTKVPPPPPPAPPAPPTPIVHTSSPPPPPPPPPP 736
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +1
Query: 148 PHQRNLGTSSRKSSAPWRGREMPSSAXXXXXXXXAQLPPSRPARPSTPVPITAR 309
P + S +S+ P R PSSA P RP+ P+ P ++++
Sbjct: 207 PRTTTTSSGSARSATPTRSNPRPSSASSKKPVSRPATPTRRPSTPTGPSIVSSK 260
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXP 869
PP PPP + P PP P P P + PPP P
Sbjct: 104 PPASAPTVSPPPVSPPPAPTSPP---PTPASPPPAPASPPPAPASPPPAP 150
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/52 (28%), Positives = 16/52 (30%), Gaps = 1/52 (1%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXX-PXXXXXXXPXXSXPPPXPP 872
PP PPP P PP P P + PPP PP
Sbjct: 375 PPGPANQTSPPPPPPPSAAAPPPPPPPKKGPAAPPPPPPPGKKGAGPPPPPP 426
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +3
Query: 747 PPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PPP P PP P P PPP PP
Sbjct: 65 PPPPPCPPPPSPPPCPPPPSPPPSPPPPQLPPPPQLPPPAPP 106
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +3
Query: 747 PPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
P P P PP P P P S PP PP
Sbjct: 50 PSPEPEPEPADCPPPPPPPPCPPPPSPPPCPPPPSPPPSPPP 91
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPP 863
PP PP + P PP P P P S PPP
Sbjct: 588 PPPVHSPPPPPVFSPPPPVFSPPPPSPVYSPPPPSHSPPPPVYSPPPP 635
>At5g67600.1 68418.m08524 expressed protein
Length = 82
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +3
Query: 747 PPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPP 863
PPP +P PP P P P PPP
Sbjct: 12 PPPQGYPPKDGYPPAGYPPAGYPPPGYAQGYPAQGYPPP 50
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXP 869
PP PPP +P PP P P P PPP P
Sbjct: 46 PPHFSPPHQPPPSPYPHPHPPPPSPYPHPHQPPPPPHVLPP----PPPTP 91
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXP 869
PP PPP P PP P P P P P P
Sbjct: 25 PPPPSHISPPPPPFSPPHHPPPPHFSPPHQPPPSPYPHPHPPPPSPYPHP 74
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTH--PXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXP 869
PP PPP H P PP P P P S PPP P
Sbjct: 552 PPPVYSPPPPPPPVHSPPPPVFSPPP--PVYSPPPPVHSPPPPVHSPPPPAP 601
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP H PP P P PPP PP
Sbjct: 596 PPPPAPVHSPPPPVH-SPPPPPPVYSPPPPVFSPPPSQSPPVVYSPPPRPP 645
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 732 GGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXP 869
GG PPP P PP P P P PPP P
Sbjct: 45 GGSSVPPPVMSPMPMMTPP---PMPMTPPPMPMTPPPMPMAPPPMP 87
>At3g62180.1 68416.m06986 invertase/pectin methylesterase inhibitor
family protein low similarity to pollen-specific pectin
esterase from Brassica rapa subsp. pekinensis
GI:1620652; contains Pfam profile PF04043: Plant
invertase/pectin methylesterase inhibitor
Length = 215
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 99 MNFTRIIFFLFVVVFATASAKP 164
MN +FFLF+ V ATA+AKP
Sbjct: 1 MNTPIKLFFLFIFVAATATAKP 22
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXX-PXXXXXXXPXXSXPPPXP 869
PP PPP T P PP P P P S PPP P
Sbjct: 90 PPPPAPKKSPPPPT-PKKSPSPPSLTPFVPHPTPKKSPSPPPTPSLPPPAP 139
>At1g80070.1 68414.m09373 splicing factor, putative strong
similarity to splicing factor Prp8 [Homo sapiens]
GI:3661610; contains Pfam profile PF01398:
Mov34/MPN/PAD-1 family
Length = 2382
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Frame = +3
Query: 720 PPXXGGXXXPP-PXTHPXXXXXPPXXXPXXXXXP 818
PP GG PP P HP PP P P
Sbjct: 12 PPGTGGSMMPPPPAAHPSYTALPPPSNPTPPVEP 45
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTHPXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP T PP P P P PPP PP
Sbjct: 51 PPSPDTQTSPPPAT----AAQPPPNQPPNTTPPPTPPSSPPPSITPPPSPP 97
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Frame = +3
Query: 747 PPPXTH--PXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPP 863
PPP H P PP P P P S PPP
Sbjct: 602 PPPPVHSPPPPVYSPPPPPPVHSPPPPVFSPPPPVHSPPPP 642
>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 589
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/52 (28%), Positives = 16/52 (30%), Gaps = 1/52 (1%)
Frame = +3
Query: 720 PPXXGGXXXPPPXTH-PXXXXXPPXXXPXXXXXPXXXXXXXPXXSXPPPXPP 872
PP PPP +H P PP P PPP PP
Sbjct: 26 PPSLPPPVPPPPPSHQPYSYPPPPPPPPHAYYQQGPHYPQFNQLQAPPPPPP 77
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,709,998
Number of Sequences: 28952
Number of extensions: 242358
Number of successful extensions: 1067
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2081245872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -