Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_M09
(956 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.25
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 33 0.25
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 33 0.44
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.59
12_02_1174 - 26696869-26698191 29 4.1
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 5.5
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.5
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 29 5.5
12_02_0299 - 17051570-17052474,17053542-17053755 29 7.2
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.5 bits (73), Expect = 0.25
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P PPPPP
Sbjct: 546 PPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPP 592
Score = 33.5 bits (73), Expect = 0.25
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P PPPPP
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPP 593
Score = 32.7 bits (71), Expect = 0.44
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPP P
Sbjct: 549 PPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLP 595
Score = 31.5 bits (68), Expect = 1.0
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPPPP
Sbjct: 568 PPPPPPPLPQSNYASSQPPPPPPPPP----LPNCLVPSPPPPPPPPP 610
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/85 (23%), Positives = 20/85 (23%)
Frame = +2
Query: 680 PXXPXPPXPXXXXXXXXXXXPXXXPPXXXXXXXXXXXXXXXXXPXPPPXPXXXXXXXXXX 859
P P PP P P PP P PPP P
Sbjct: 544 PPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQ--PPPPPPPPPLPNCLVPS 601
Query: 860 XXPXXPXXXXXXXXXXXPPPXXXPP 934
P P PPP PP
Sbjct: 602 PPPPPPPPPILPNRSVPPPPPPPPP 626
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/52 (30%), Positives = 16/52 (30%), Gaps = 5/52 (9%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXX-----PXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPPPP
Sbjct: 668 PPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPP 719
Score = 28.3 bits (60), Expect = 9.6
Identities = 20/85 (23%), Positives = 20/85 (23%)
Frame = +2
Query: 680 PXXPXPPXPXXXXXXXXXXXPXXXPPXXXXXXXXXXXXXXXXXPXPPPXPXXXXXXXXXX 859
P P PP P P PP P PPP P
Sbjct: 565 PPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPS------PPPPPPPPPILPNRSVP 618
Query: 860 XXPXXPXXXXXXXXXXXPPPXXXPP 934
P P PPP PP
Sbjct: 619 PPPPPPPPLPNHSVLPPPPPPPPPP 643
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPP 827
PPPPP P PP P P P PPPP
Sbjct: 603 PPPPPPPPILPNRSVPPPPPPPPPLP-----NHSVLPPPPPPPPPP 643
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 33.5 bits (73), Expect = 0.25
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P P P P P PPPPP
Sbjct: 57 PPPPPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPP 103
Score = 32.7 bits (71), Expect = 0.44
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPPP
Sbjct: 72 PPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPLPPPP 118
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 32.7 bits (71), Expect = 0.44
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPPP
Sbjct: 1137 PPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPP 1183
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.3 bits (70), Expect = 0.59
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPPPP
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPP--PAKGPPPPPPP 359
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPP 827
PPPPP P PP P P PPPP
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P PPPPP
Sbjct: 326 PPPPPPPKAAPPPPP--PKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
P PPP P PP P P P PPP P
Sbjct: 121 PVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRP 167
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPP P P PP P P P PPPPP
Sbjct: 904 PPPAPSATANTASALSPPPPRPPGAP--PPPPPPGKPGGPPPPPPPP 948
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPPPP
Sbjct: 92 PPPPPPPYGVNSSQPPPPPPPPPSPP----------PSAPPPPPPPP 128
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPPXXXL 842
PPPPP P PP P P PPPPP L
Sbjct: 232 PPPPPPKPANIAGAPGLPLPPPPPPPPGPPPREIV-PGQTLLPPPPPPRPL 281
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P P P P P PPPPP
Sbjct: 289 PPPPPPPAFPFPFPQLPPL---PHFPPLPSFYPSPPPPPPPPPPPPP 332
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,093,251
Number of Sequences: 37544
Number of extensions: 258582
Number of successful extensions: 2401
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1774
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2764678640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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