Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_M09
(956 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 34 0.16
At1g61080.1 68414.m06877 proline-rich family protein 34 0.16
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 33 0.21
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 33 0.21
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 33 0.37
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 31 0.86
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 31 0.86
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 30 2.0
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 30 2.6
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 29 3.5
At2g27390.1 68415.m03306 proline-rich family protein contains pr... 29 3.5
At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family... 29 3.5
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 29 4.6
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 29 6.0
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 29 6.0
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 8.0
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 693 PPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPP P PP P P P PPPPP
Sbjct: 431 PPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPP 476
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P P P P P PPPPP
Sbjct: 457 PPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPP 503
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPPPP
Sbjct: 451 PPPPPPPPPPPPVYSPPPPPPPPPPP----PPVYSPPPPSPPPPPPP 493
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPPPP
Sbjct: 466 PPPPPPPPPPPPPVYSPPPPSPPPPP----PPVYSPPPPPPPPPPPP 508
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXP--XPPPPP 830
PPPPP P PP P P P PPPPP
Sbjct: 468 PPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPP 516
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPX---PPPPP 830
PPPPP P PP P P P PPPPP
Sbjct: 453 PPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPP 502
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP PP P P PPPPP
Sbjct: 609 PPPPPPCIEPPPPPPCIEYSPPPPPPVVHYSSPPPPPVYYSSPPPPP 655
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPP P P P P P PPPPP
Sbjct: 426 PPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPP 472
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPP P P PP P P PPPPP
Sbjct: 411 PPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPP 457
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPPP
Sbjct: 504 PPPPPVYSPPPPPVYSSP--PPPPSPAPTPVYCTRPPPPPPHSPPPP 548
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPP 827
PPPPP P PP P P P PPPP
Sbjct: 419 PPPPPPPPLSFIKTASLPLPSPPPTPPIADIAISMPPPPPPPPPPP 464
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P PPPPP
Sbjct: 690 PPPPPPPPMQHSTVTKVPPPPPPAPPAPPTPIVHTSSPPPPPPPPPP 736
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPP P
Sbjct: 693 PPPPPMQHSTVTKVPPPPPPAPPAPPTPIVHTSSPPPPPPPPPPPAP 739
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPP 827
PPPPP P P P P P PPPP
Sbjct: 692 PPPPPPMQHSTVTKVPPPPPPAPPAPPTPIVHTSSPPPPPPPPPPP 737
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P PPPPP
Sbjct: 487 PPPPPLFTSTTSFSPSQPPPPPPPPPLFMSTTSFSPSQPPPPPPPPP 533
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P PPPPP
Sbjct: 601 PPPPPPPSSRSIPSPSAPPPPPPPPPSFGSTGNKRQAQPPPPPPPPP 647
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P PPPPP
Sbjct: 641 PPPPPPPPTRIPAAKCAPPPPPPPPTSHSGSIRVGPPSTPPPPPPPP 687
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPP P P PP P P P PPPPP
Sbjct: 579 PPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPPPPPPPP 625
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPPPP
Sbjct: 622 PPPPPSFGSTGNKRQAQPPPPPPPPPPTRIPAAKCAP---PPPPPPP 665
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXP--XXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPPPP
Sbjct: 484 PPPPPPPPLFTSTTSFSPSQPPPPPPPPPLFMSTTSFSPSQPPPPPPPP 532
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P P P P PPPPP
Sbjct: 577 PPPPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPPPPPP 623
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/85 (23%), Positives = 20/85 (23%)
Frame = +2
Query: 680 PXXPXPPXPXXXXXXXXXXXPXXXPPXXXXXXXXXXXXXXXXXPXPPPXPXXXXXXXXXX 859
P P PP P P PP P PPP P
Sbjct: 639 PPPPPPPPPPTRIPAAKCAPPPPPPPPTSHSGSIRVGPPST--PPPPPPPPPKANISNAP 696
Query: 860 XXPXXPXXXXXXXXXXXPPPXXXPP 934
P P PPP PP
Sbjct: 697 KPPAPPPLPPSSTRLGAPPPPPPPP 721
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPP P PP P P PPPPP
Sbjct: 578 PPPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPPPPPPP 624
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P PPP P
Sbjct: 659 PPPPPPPTSHSGSIRVGPPSTPPPPPPPPPKANISNAPKPPAPPPLP 705
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P PP PP
Sbjct: 660 PPPPPPTSHSGSIRVGPPSTPPPPPPPPPKANISNAPKPPAPPPLPP 706
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/52 (30%), Positives = 16/52 (30%), Gaps = 5/52 (9%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXP-----XXXPXPPPPP 830
PPPPP P PP P P P PPPPP
Sbjct: 681 PPPPPPPPKANISNAPKPPAPPPLPPSSTRLGAPPPPPPPPLSKTPAPPPPP 732
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPP P
Sbjct: 508 PPPPPLFMSTTSFSPSQP-PPPPPPPPLFTSTTSFSPSQPPPPPPLP 553
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P PPPPP
Sbjct: 70 PPPPPPQSLPPPSPSPEPEHYPPPPYHHYITPSPPPPRPLPPPPPPP 116
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPX--PPPPP 830
PPPPP P PP P P P PPPPP
Sbjct: 382 PPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPP 430
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPP 827
PPPPP P P P P P PPPP
Sbjct: 386 PPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPP 431
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/48 (31%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXP-XXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PP PP
Sbjct: 394 PPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPSPP 441
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P P PPP
Sbjct: 379 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPP---PPPSPPP 422
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/49 (30%), Positives = 15/49 (30%), Gaps = 2/49 (4%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXX--PPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPP P
Sbjct: 403 PPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPSPPYVYPPPPPSP 451
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPPPP
Sbjct: 49 PPPPPSPPPPSCT----PSPPPPSPPPPKKSSCPPSPLPPPPPPPPP 91
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPP P P PP P P P PPPP
Sbjct: 46 PPPSPSPEPEPEPADCPPPPPPPPCPPPPSPPPCPPPPSPPPSPPPP 92
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPP P P P P P P PPPPP
Sbjct: 518 PPPAPVNSPPPPVYSPPPPPPPVHSPPPPVHSPPPPPVYSPPPPPPP 564
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPPXXXL 842
PPPP P PP P P P PPPP L
Sbjct: 34 PPPPFSPPHHPPPPHFSPPHQPPPSPYPHPHPPPPSPYPHPHQPPPPPHVL 84
>At2g27390.1 68415.m03306 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PP PP P P P P P PPPPP
Sbjct: 64 PPEPPLPPRFELPPPLFPPPPLPRLPPPLLPPPEEPPREPPPPPPPP 110
>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 589
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PP PP P P P P P PPPPP
Sbjct: 6 PPYPPLPQPPSQNSLAPPPPPPSLPPPVPPPPPSHQPYSYPPPPPPP 52
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/48 (31%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXP-PXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P P P P P PPPPP
Sbjct: 441 PPPPPYSKMSPSVRAYPPPPPPSPSPPPPYVYSSPPPPYVYSSPPPPP 488
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPPXXXL 842
PP PP P PP P P P PPPPP L
Sbjct: 1084 PPLPPSSLPPPPPAALFPPLPPP--PSQPPPPPLSPPPSPPPPPPPPSQSL 1132
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P PP P P P PPP
Sbjct: 104 PPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLPPP 150
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/48 (31%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXP-PXXPXXXXXXXXXXPXXXPXPPPPP 830
PPPPP P P P P P PPPPP
Sbjct: 69 PPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAITPPPPP 116
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/49 (30%), Positives = 15/49 (30%), Gaps = 2/49 (4%)
Frame = +3
Query: 690 PPPPPXXXXXXXXXXXXPXXXPPXXPXXXXXXXXXXPXXXP--XPPPPP 830
PPPPP P P P P P PPPPP
Sbjct: 617 PPPPPVHSPPPPVFSPPPPVHSPPPPVYSPPPPVYSPPPPPVKSPPPPP 665
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,311,993
Number of Sequences: 28952
Number of extensions: 177049
Number of successful extensions: 1469
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2304931176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -