Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_M08
(871 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subun... 33 1.3
U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit o... 33 1.3
BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein... 33 1.3
AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein... 33 1.3
BC073884-1|AAH73884.1| 601|Homo sapiens TAF3 protein protein. 32 2.3
BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein. 32 2.3
BC045106-1|AAH45106.1| 539|Homo sapiens TAF3 protein protein. 32 2.3
BC017320-1|AAH17320.1| 539|Homo sapiens Unknown (protein for IM... 32 2.3
AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,... 32 2.3
AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,... 32 2.3
AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,... 32 2.3
AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein pr... 32 2.3
AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein. 32 2.3
BT009783-1|AAP88785.1| 667|Homo sapiens calpastatin protein. 30 9.5
BC013579-1|AAH13579.1| 667|Homo sapiens CAST protein protein. 30 9.5
AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15 pr... 30 9.5
AB037901-1|BAB16102.1| 1056|Homo sapiens GASC-1 protein. 30 9.5
AB018323-1|BAA34500.1| 1100|Homo sapiens KIAA0780 protein protein. 30 9.5
>U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subunit
protein.
Length = 1093
Score = 33.1 bits (72), Expect = 1.3
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Frame = +3
Query: 216 EFDEMDSDGVFEDEEVKSQXXXXXXXXXXXXNEDLV---LSEQSSTATIAVETKSTRTLK 386
E D DS E E NED SEQ S + ++ RT K
Sbjct: 682 EEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQDSESGRESGLENKRTAK 741
Query: 387 RKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDDQIN--EKSVEPKTASESNXVIK 560
R N++ K KS K+ ++ S S S +++D + E EP++ SES V K
Sbjct: 742 R--NSKAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSESESEPESESESRRVTK 799
>U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit of the
AP-3 complex protein.
Length = 1094
Score = 33.1 bits (72), Expect = 1.3
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Frame = +3
Query: 216 EFDEMDSDGVFEDEEVKSQXXXXXXXXXXXXNEDLV---LSEQSSTATIAVETKSTRTLK 386
E D DS E E NED SEQ S + ++ RT K
Sbjct: 682 EEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQDSESGRESGLENKRTAK 741
Query: 387 RKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDDQIN--EKSVEPKTASESNXVIK 560
R N++ K KS K+ ++ S S S +++D + E EP++ SES V K
Sbjct: 742 R--NSKAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSESESEPESESESRRVTK 799
>BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein
complex 3, beta 1 subunit protein.
Length = 1094
Score = 33.1 bits (72), Expect = 1.3
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Frame = +3
Query: 216 EFDEMDSDGVFEDEEVKSQXXXXXXXXXXXXNEDLV---LSEQSSTATIAVETKSTRTLK 386
E D DS E E NED SEQ S + ++ RT K
Sbjct: 682 EEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQDSESGRESGLENKRTAK 741
Query: 387 RKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDDQIN--EKSVEPKTASESNXVIK 560
R N++ K KS K+ ++ S S S +++D + E EP++ SES V K
Sbjct: 742 R--NSKAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSESESEPESESESRRVTK 799
>AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein
complex 3 beta 1 subunit protein.
Length = 800
Score = 33.1 bits (72), Expect = 1.3
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Frame = +3
Query: 216 EFDEMDSDGVFEDEEVKSQXXXXXXXXXXXXNEDLV---LSEQSSTATIAVETKSTRTLK 386
E D DS E E NED SEQ S + ++ RT K
Sbjct: 682 EEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQDSESGRESGLENKRTAK 741
Query: 387 RKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDDQIN--EKSVEPKTASESNXVIK 560
R N++ K KS K+ ++ S S S +++D + E EP++ SES V K
Sbjct: 742 R--NSKAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSESESEPESESESRRVTK 799
>BC073884-1|AAH73884.1| 601|Homo sapiens TAF3 protein protein.
Length = 601
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/89 (20%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +3
Query: 339 STATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLN------RPSSISLVSSKTVDD 500
S A + +S +T+ ++ + + KS ++ + K+ + RP + + S T+ +
Sbjct: 356 SPAMVGSPIRSPKTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSE 415
Query: 501 QINEKSVEPKTASESNXVIKINTDLXPKK 587
+I++++++ K K+N++ PKK
Sbjct: 416 KISKETIQVKQIQTPPDAGKLNSENQPKK 444
>BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein.
Length = 771
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/89 (20%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +3
Query: 339 STATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLN------RPSSISLVSSKTVDD 500
S A + +S +T+ ++ + + KS ++ + K+ + RP + + S T+ +
Sbjct: 348 SPAMVGSPIRSPKTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSE 407
Query: 501 QINEKSVEPKTASESNXVIKINTDLXPKK 587
+I++++++ K K+N++ PKK
Sbjct: 408 KISKETIQVKQIQTPPDAGKLNSENQPKK 436
>BC045106-1|AAH45106.1| 539|Homo sapiens TAF3 protein protein.
Length = 539
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/89 (20%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +3
Query: 339 STATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLN------RPSSISLVSSKTVDD 500
S A + +S +T+ ++ + + KS ++ + K+ + RP + + S T+ +
Sbjct: 291 SPAMVGSPIRSPKTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSE 350
Query: 501 QINEKSVEPKTASESNXVIKINTDLXPKK 587
+I++++++ K K+N++ PKK
Sbjct: 351 KISKETIQVKQIQTPPDAGKLNSENQPKK 379
>BC017320-1|AAH17320.1| 539|Homo sapiens Unknown (protein for
IMAGE:3547166) protein.
Length = 539
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/89 (20%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +3
Query: 339 STATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLN------RPSSISLVSSKTVDD 500
S A + +S +T+ ++ + + KS ++ + K+ + RP + + S T+ +
Sbjct: 291 SPAMVGSPIRSPKTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSE 350
Query: 501 QINEKSVEPKTASESNXVIKINTDLXPKK 587
+I++++++ K K+N++ PKK
Sbjct: 351 KISKETIQVKQIQTPPDAGKLNSENQPKK 379
>AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/89 (20%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +3
Query: 339 STATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLN------RPSSISLVSSKTVDD 500
S A + +S +T+ ++ + + KS ++ + K+ + RP + + S T+ +
Sbjct: 291 SPAMVGSPIRSPKTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSE 350
Query: 501 QINEKSVEPKTASESNXVIKINTDLXPKK 587
+I++++++ K K+N++ PKK
Sbjct: 351 KISKETIQVKQIQTPPDAGKLNSENQPKK 379
>AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/89 (20%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +3
Query: 339 STATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLN------RPSSISLVSSKTVDD 500
S A + +S +T+ ++ + + KS ++ + K+ + RP + + S T+ +
Sbjct: 291 SPAMVGSPIRSPKTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSE 350
Query: 501 QINEKSVEPKTASESNXVIKINTDLXPKK 587
+I++++++ K K+N++ PKK
Sbjct: 351 KISKETIQVKQIQTPPDAGKLNSENQPKK 379
>AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/89 (20%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +3
Query: 339 STATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLN------RPSSISLVSSKTVDD 500
S A + +S +T+ ++ + + KS ++ + K+ + RP + + S T+ +
Sbjct: 291 SPAMVGSPIRSPKTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSE 350
Query: 501 QINEKSVEPKTASESNXVIKINTDLXPKK 587
+I++++++ K K+N++ PKK
Sbjct: 351 KISKETIQVKQIQTPPDAGKLNSENQPKK 379
>AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein
protein.
Length = 681
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/89 (20%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +3
Query: 339 STATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLN------RPSSISLVSSKTVDD 500
S A + +S +T+ ++ + + KS ++ + K+ + RP + + S T+ +
Sbjct: 269 SPAMVGSPIRSPKTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSE 328
Query: 501 QINEKSVEPKTASESNXVIKINTDLXPKK 587
+I++++++ K K+N++ PKK
Sbjct: 329 KISKETIQVKQIQTPPDAGKLNSENQPKK 357
>AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein.
Length = 727
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/89 (20%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +3
Query: 339 STATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLN------RPSSISLVSSKTVDD 500
S A + +S +T+ ++ + + KS ++ + K+ + RP + + S T+ +
Sbjct: 291 SPAMVGSPIRSPKTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSE 350
Query: 501 QINEKSVEPKTASESNXVIKINTDLXPKK 587
+I++++++ K K+N++ PKK
Sbjct: 351 KISKETIQVKQIQTPPDAGKLNSENQPKK 379
>BT009783-1|AAP88785.1| 667|Homo sapiens calpastatin protein.
Length = 667
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +3
Query: 360 ETKSTRTLKRKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDDQINEKSVEPKT 533
ETK+ +T K + TK KS A N + VS ++ + Q +EKS EPKT
Sbjct: 5 ETKAVKTEPEKKSQSTKPKSLPK-QASDTGSNDAHNKKAVS-RSAEQQPSEKSTEPKT 60
>BC013579-1|AAH13579.1| 667|Homo sapiens CAST protein protein.
Length = 667
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +3
Query: 360 ETKSTRTLKRKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDDQINEKSVEPKT 533
ETK+ +T K + TK KS A N + VS ++ + Q +EKS EPKT
Sbjct: 5 ETKAVKTEPEKKSQSTKPKSLPK-QASDTGSNDAHNKKAVS-RSAEQQPSEKSTEPKT 60
>AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15
protein.
Length = 2789
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 309 NEDLVLSE-QSSTATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLNRPSSISL 476
+E L+ E Q TA ++ +K + K N KD + EN+ V+N +S+SL
Sbjct: 1181 DEKLIEKENQIDTAFLSSTSKYEKLEKHSANHNVKDATKENSCDANEVINESNSVSL 1237
>AB037901-1|BAB16102.1| 1056|Homo sapiens GASC-1 protein.
Length = 1056
Score = 30.3 bits (65), Expect = 9.5
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +3
Query: 249 EDEEVKSQXXXXXXXXXXXXNEDLVLSEQSSTATIAVETKSTRTLKRKTNAETKDKSAEN 428
E+EEV + +DL +SE+S AV+ ++T + ++ ++ + +N
Sbjct: 387 EEEEVSDEVDGAEVPNPDSVTDDLKVSEKSEA---AVKLRNTEASSEEESSASRMQVEQN 443
Query: 429 ASAK-KIVLNRPSSISLVSS-KTVDDQINEKSVEPKTASESNXVIKINT 569
S K+ N S S+ KT DD+ P +SE++ I ++T
Sbjct: 444 LSDHIKLSGNSCLSTSVTEDIKTEDDKAYAYRSVPSISSEADDSIPLST 492
>AB018323-1|BAA34500.1| 1100|Homo sapiens KIAA0780 protein protein.
Length = 1100
Score = 30.3 bits (65), Expect = 9.5
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +3
Query: 249 EDEEVKSQXXXXXXXXXXXXNEDLVLSEQSSTATIAVETKSTRTLKRKTNAETKDKSAEN 428
E+EEV + +DL +SE+S AV+ ++T + ++ ++ + +N
Sbjct: 440 EEEEVSDEVDGAEVPNPDSVTDDLKVSEKSEA---AVKLRNTEASSEEESSASRMQVEQN 496
Query: 429 ASAK-KIVLNRPSSISLVSS-KTVDDQINEKSVEPKTASESNXVIKINT 569
S K+ N S S+ KT DD+ P +SE++ I ++T
Sbjct: 497 LSDHIKLSGNSCLSTSVTEDIKTEDDKAYAYRSVPSISSEADDSIPLST 545
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,145,458
Number of Sequences: 237096
Number of extensions: 884323
Number of successful extensions: 1752
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1748
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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