Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_M06
(1307 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 8e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.005
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.087
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 31 0.46
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.81
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.4
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 3.3
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 28 3.3
SPCC645.13 |||transcription elongation regulator|Schizosaccharom... 26 10.0
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.9 bits (89), Expect = 8e-04
Identities = 30/121 (24%), Positives = 40/121 (33%), Gaps = 2/121 (1%)
Frame = +3
Query: 774 RPXANXPXAARPXXPPXPRSARTXGXXXQXSRGNXPRRXAPQXXAPXXXXPTTXXPPXPK 953
RP P + P PP P + + PR AP P +T PP P
Sbjct: 240 RPPERVPSLSAPAPPPIPPPSN---GTVSSPPNSPPRPIAPVSMNPAIN--STSKPPLPP 294
Query: 954 PXTTTXXPDXXPPRERXPPXXPPXXSQ--TPPNSRRXXXXAPPPXPXXKXTTRAQKLPKX 1127
P + ++R PP PP PP + PP P + A +P
Sbjct: 295 PSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLP 354
Query: 1128 P 1130
P
Sbjct: 355 P 355
Score = 35.5 bits (78), Expect = 0.016
Identities = 40/167 (23%), Positives = 54/167 (32%), Gaps = 18/167 (10%)
Frame = +2
Query: 392 PPAXAPTRPXXRXXXXRXP------PXAGARTAXPXGXXARTXRXTPPXPQAEGTXTRPX 553
PP+ +RP R P P + + P R P T P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL 292
Query: 554 RPPXA---SXRXTKTPEDPAANPPKXXRHXHGP--GPTPTHATRKGXAPAPRSKT-GXTP 715
PP + + + P PP R+ P G ++++ P PRS G P
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352
Query: 716 RAPXX----PPXXTRXAP--GRXAXTTXRXRPXRSPPXPXTXAPQRA 838
P PP R AP GR R +PP P P R+
Sbjct: 353 LPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRS 399
Score = 34.7 bits (76), Expect = 0.029
Identities = 25/98 (25%), Positives = 29/98 (29%)
Frame = +3
Query: 792 PXAARPXXPPXPRSARTXGXXXQXSRGNXPRRXAPQXXAPXXXXPTTXXPPXPKPXTTTX 971
P PP PRSA + G + P PP T+
Sbjct: 355 PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTST 414
Query: 972 XPDXXPPRERXPPXXPPXXSQTPPNSRRXXXXAPPPXP 1085
P PP PP PP + P S A PP P
Sbjct: 415 PPVPTPPS--LPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Score = 33.1 bits (72), Expect = 0.087
Identities = 29/109 (26%), Positives = 34/109 (31%), Gaps = 5/109 (4%)
Frame = +2
Query: 446 PPXAGART-----AXPXGXXARTXRXTPPXPQAEGTXTRPXRPPXASXRXTKTPEDPAAN 610
PP + +R A P R+ PP A T T P P S + P P +
Sbjct: 377 PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPV-PTPPSLPPSAPPSLPPSA 435
Query: 611 PPKXXRHXHGPGPTPTHATRKGXAPAPRSKTGXTPRAPXXPPXXTRXAP 757
PP P P A PA P A PP AP
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 31.1 bits (67), Expect = 0.35
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 6/67 (8%)
Frame = +3
Query: 939 PPXPKPXTTTXXPDXXPPRERXPPXXPPXXS------QTPPNSRRXXXXAPPPXPXXKXT 1100
PP P P + PP+ R P PP S Q PP S PP P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Query: 1101 TRAQKLP 1121
A LP
Sbjct: 398 RSAPALP 404
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.1 bits (82), Expect = 0.005
Identities = 22/79 (27%), Positives = 27/79 (34%)
Frame = +3
Query: 906 APXXXXPTTXXPPXPKPXTTTXXPDXXPPRERXPPXXPPXXSQTPPNSRRXXXXAPPPXP 1085
AP P+ PP P P ++ P P PP PP + P PPP
Sbjct: 1158 APPVPKPSVAAPPVPAP--SSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPST 1215
Query: 1086 XXKXTTRAQKLPKXPXXXA 1142
T + LP P A
Sbjct: 1216 APPVPTPSAGLPPVPVPTA 1234
Score = 33.1 bits (72), Expect = 0.087
Identities = 56/247 (22%), Positives = 67/247 (27%), Gaps = 16/247 (6%)
Frame = +2
Query: 512 PPXPQAEGTXTRPXRP-------PXASXRXTKTPEDPAANPPKXXRHXHGPGPTPTHATR 670
P P ++ T P P P S + P A PP P P PT
Sbjct: 992 PSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTP- 1050
Query: 671 KGXAPAPRSKTGXTPRAPXXPPXXTRXAPGRXAXTTXRXRPXRSP----PXPXTXAPQRA 838
P P+S +G P AP P + P A + P S P P AP
Sbjct: 1051 ----PVPKSSSG-APSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Query: 839 XXRXXXPXXPREXXXXXXXXXXXXXXXXPX-DXVXPXPK-TXHDDXXPGXXAPPRTXTXX 1012
P P P P PK + P P
Sbjct: 1106 KPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPS 1165
Query: 1013 XXAXRXPDPTKQ-PTXPXXRA--PTXPXXEXHDQGTKAPEXATXXSXPTSPXNXPTPXXX 1183
A P P+ P P A P P K P++ PTP
Sbjct: 1166 VAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Query: 1184 PPPTPSP 1204
PP P P
Sbjct: 1226 LPPVPVP 1232
Score = 30.7 bits (66), Expect = 0.46
Identities = 41/222 (18%), Positives = 56/222 (25%)
Frame = +2
Query: 509 TPPXPQAEGTXTRPXRPPXASXRXTKTPEDPAANPPKXXRHXHGPGPTPTHATRKGXAPA 688
TPP P++ P PP ++ P PA + G P P + P
Sbjct: 1049 TPPVPKSSSGA--PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPK 1106
Query: 689 PRSKTGXTPRAPXXPPXXTRXAPGRXAXTTXRXRPXRSPPXPXTXAPQRAXXRXXXPXXP 868
P P AP P + + P P P AP P
Sbjct: 1107 PSVAVPPVP-APSGAPPVPKPSVAAPPVPVPSGAP--PVPKPSVAAPPVPAPSGAPPVPK 1163
Query: 869 REXXXXXXXXXXXXXXXXPXDXVXPXPKTXHDDXXPGXXAPPRTXTXXXXAXRXPDPTKQ 1048
P P + P + P PT
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPS 1223
Query: 1049 PTXPXXRAPTXPXXEXHDQGTKAPEXATXXSXPTSPXNXPTP 1174
P PT ++AP +T S SP + +P
Sbjct: 1224 AGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASP 1265
Score = 27.9 bits (59), Expect = 3.3
Identities = 20/76 (26%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Frame = +3
Query: 906 APXXXXPTTXXPPXPKPXTT--TXXPDXXPPRERXPPXXPPXXSQTP-PNSRRXXXXAPP 1076
AP P+ PP P P T P PP + P P P+S AP
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Query: 1077 PXPXXKXTTRAQKLPK 1124
P + +PK
Sbjct: 1081 GAPPVPAPSGIPPVPK 1096
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = -1
Query: 194 PRGLPPAPXXXXLXXXSXFSRAGXXXPPXPPLXPXXXXXXXAPPXTXXRVGRPLXPXP 21
P G PP P + S A P P APP V P P P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.087
Identities = 28/86 (32%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Frame = +2
Query: 512 PPXPQAEGTXTRPXRPPXASXRXTKTPEDPAANPPKXXRHXHGPG--PTPTH--ATRKGX 679
PP PQ+E RP P A R + P PA+ PP + P P P A K
Sbjct: 130 PPTPQSE---LRP--PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 680 APAPRSKTGXTPRAPXXPPXXTRXAP 757
AP + P P PP AP
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 31.5 bits (68), Expect = 0.27
Identities = 21/65 (32%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Frame = +3
Query: 939 PPXPKPXTTTXXPDXXPPRERXPP----XXPPXXSQTPPNSRRXXXXAPPPXPXXKXTTR 1106
P P P + P PPR PP PP S+ PP A P P K
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP-VKSPPS 186
Query: 1107 AQKLP 1121
A LP
Sbjct: 187 APSLP 191
Score = 30.7 bits (66), Expect = 0.46
Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Frame = +3
Query: 924 PTTXXPPXPKPXTTTXXPDXXPPRERXPPXXPPXXSQTPP--NSRRXXXXAPPPXPXXKX 1097
P P P + P PP P PP SQ P S R APP
Sbjct: 174 PAQPAAPVKSPPSAPSLPSAVPPMP--PKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNV 231
Query: 1098 TTRAQKLP 1121
T+ + K P
Sbjct: 232 TSESPKFP 239
Score = 29.9 bits (64), Expect = 0.81
Identities = 22/75 (29%), Positives = 26/75 (34%), Gaps = 6/75 (8%)
Frame = +3
Query: 879 PRRXAPQXXAPXXXXPTTXXP----PXPKPXTTTXXPDXXPP--RERXPPXXPPXXSQTP 1040
P AP PT+ P P P P + P PP PP P ++P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 1041 PNSRRXXXXAPPPXP 1085
P S A PP P
Sbjct: 185 P-SAPSLPSAVPPMP 198
Score = 26.6 bits (56), Expect = 7.6
Identities = 19/69 (27%), Positives = 23/69 (33%)
Frame = +3
Query: 924 PTTXXPPXPKPXTTTXXPDXXPPRERXPPXXPPXXSQTPPNSRRXXXXAPPPXPXXKXTT 1103
P T PP +P P PP P PP S PP ++ PP +
Sbjct: 139 PPTSAPP--RPSIPPPSPASAPP---IPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSA 193
Query: 1104 RAQKLPKXP 1130
PK P
Sbjct: 194 VPPMPPKVP 202
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 30.7 bits (66), Expect = 0.46
Identities = 22/86 (25%), Positives = 29/86 (33%)
Frame = +2
Query: 512 PPXPQAEGTXTRPXRPPXASXRXTKTPEDPAANPPKXXRHXHGPGPTPTHATRKGXAPAP 691
PP P + + P P S + P PAA+ P P + G AP P
Sbjct: 48 PPPPSVD--HSAPPSGPPPSYSNSAAPATPAASASSAAP---APAPAASQNRAYGAAPQP 102
Query: 692 RSKTGXTPRAPXXPPXXTRXAPGRXA 769
G P+ P P P + A
Sbjct: 103 YPPQGGYPQQPYYYPNQPNYYPAQPA 128
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.81
Identities = 21/77 (27%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Frame = +2
Query: 533 GTXTRPXRP--PXASXRXTKTPEDPAANPPKXXRHXHGPGPTPTHATRKGXAPAPRSKTG 706
G T P P P S T TP PA+ P + + T P S T
Sbjct: 295 GNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTP 354
Query: 707 XTPRAPXXPPXXTRXAP 757
TP P T P
Sbjct: 355 VTPTVPPTSTSSTSTPP 371
Score = 26.6 bits (56), Expect = 7.6
Identities = 23/95 (24%), Positives = 28/95 (29%)
Frame = +2
Query: 536 TXTRPXRPPXASXRXTKTPEDPAANPPKXXRHXHGPGPTPTHATRKGXAPAPRSKTGXTP 715
T P PP S T P P + P + + T P S + TP
Sbjct: 132 TPITPTVPP-TSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLSTP 190
Query: 716 RAPXXPPXXTRXAPGRXAXTTXRXRPXRSPPXPXT 820
P PP T T+ S P P T
Sbjct: 191 ITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTT 225
Score = 26.6 bits (56), Expect = 7.6
Identities = 25/95 (26%), Positives = 28/95 (29%)
Frame = +2
Query: 536 TXTRPXRPPXASXRXTKTPEDPAANPPKXXRHXHGPGPTPTHATRKGXAPAPRSKTGXTP 715
T P PP S T P P + P T T T P S + TP
Sbjct: 189 TPITPTVPP-TSTSSTSIPIPPTSTSSTDTNSSPLP-TTSTSCTTSTSIPTGGSSSLSTP 246
Query: 716 RAPXXPPXXTRXAPGRXAXTTXRXRPXRSPPXPXT 820
P PP T T+ S P P T
Sbjct: 247 ITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTT 281
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 894 PQXXAPXXXXPTTXXPPXPKPXTTTXXPDXXPPRERXPPXXPP 1022
PQ AP P P P P + P PP PP PP
Sbjct: 1694 PQSAAP----PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +3
Query: 939 PPXPKPXTTTXXPDXXPPRERXPPXXPPXXSQTPPNSRRXXXXAPPPXP 1085
P P PP+ P PP S PP S PP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 3.3
Identities = 18/74 (24%), Positives = 22/74 (29%)
Frame = +2
Query: 392 PPAXAPTRPXXRXXXXRXPPXAGARTAXPXGXXARTXRXTPPXPQAEGTXTRPXRPPXAS 571
PP A PP G P R P T P P A+
Sbjct: 910 PPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVAAA 969
Query: 572 XRXTKTPEDPAANP 613
R + +P P +NP
Sbjct: 970 SRISSSPNMPPSNP 983
Score = 26.2 bits (55), Expect = 10.0
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = +2
Query: 542 TRPXRPPXASXRXTKTPEDPAANPPKXXRHXHGPGPTPTHATRKGXAPAPRSKTGXTPRA 721
T P PP AS + P + PPK H P TR P TP A
Sbjct: 906 TLPPPPPTASMTAS-APAIASPPPPKVGETYH---PPTASGTRVPPVQQPSHPNPYTPVA 961
Query: 722 PXXP 733
P P
Sbjct: 962 PQSP 965
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = +3
Query: 1032 QTPPNSRRXXXXA---PPPXPXXKXTTRAQKLPK 1124
Q PPN R A PPP P K TR K P+
Sbjct: 10 QPPPNDSRSSTPATGPPPPIPKIKIKTREPKGPR 43
>SPCC645.13 |||transcription elongation
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +2
Query: 533 GTXTRPXRPPXASXRXTKTPEDPAANPPKXXRHXHGPGPTPTHATRKGXAPAPRSK 700
G TR R + + TP+ + +PP + G T TH R AP K
Sbjct: 137 GMTTRSGRQSPRTPIGSTTPKS-SHSPPSTRKRRGSVGTTATHTKRSKNAPKTSPK 191
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.135 0.458
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,410,900
Number of Sequences: 5004
Number of extensions: 32024
Number of successful extensions: 189
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 715384080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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