Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_M04
         (878 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   1.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   3.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.7  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.7  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   9.7  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   9.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 291  FQINDRYWCSKGASPGK 341
            F +N  YW  KGA PGK
Sbjct: 2544 FSLN--YWIEKGADPGK 2558


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 372 SGGRST*RCSLCPDWRLCCTSTGR*SGTIP*SFEPLRFVF 253
           SG  +T + S C D    C S    S ++P   EPL  +F
Sbjct: 22  SGPNATLQSSACTDDLSSCWSEDMGSFSLPLDLEPLPSLF 61


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = +2

Query: 167 LRKHGFEEN-LMRNWVCLVEHESSRDTSKTNTNRNGSK 277
           L K     N  +R ++C  E E+    SK   N  G+K
Sbjct: 320 LEKSNLNHNEQLRKYLCKNEDETKNHYSKNTYNEQGNK 357


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = +2

Query: 167 LRKHGFEEN-LMRNWVCLVEHESSRDTSKTNTNRNGSK 277
           L K     N  +R ++C  E E+    SK   N  G+K
Sbjct: 212 LEKSNLNHNEQLRKYLCKNEDETKNHYSKNTYNEQGNK 249


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 575 VKKLALSTQFCFEEIESKVYPEVH 504
           +  LAL   +CF     KV+P  H
Sbjct: 173 IMTLALGNPYCFNSSVYKVFPVEH 196


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 185 RSHVSSAHARDRXS*TFWLQNQRRGQPKR 99
           R  ++SA   +      W QN+R  Q KR
Sbjct: 283 RIEIASALQLNETQVKIWFQNRRMKQKKR 311


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -1

Query: 416 VNFLSAFRCLSNVVSQEV 363
           +NF++ FR ++N++   V
Sbjct: 74  INFVATFRTIANIILMAV 91


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 185 RSHVSSAHARDRXS*TFWLQNQRRGQPKR 99
           R  ++SA   +      W QN+R  Q KR
Sbjct: 72  RIEIASALQLNETQVKIWFQNRRMKQKKR 100


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 185 RSHVSSAHARDRXS*TFWLQNQRRGQPKR 99
           R  ++SA   +      W QN+R  Q KR
Sbjct: 72  RIEIASALQLNETQVKIWFQNRRMKQKKR 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,839
Number of Sequences: 336
Number of extensions: 2334
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)