Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_M02
         (909 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9LVN1 Cluster: Gb|AAD23008.1; n=2; Arabidopsis thalian...    36   1.4  
UniRef50_Q6YU87 Cluster: Proline-rich protein-like; n=3; Oryza s...    35   3.3  
UniRef50_Q0CQD0 Cluster: Predicted protein; n=1; Aspergillus ter...    35   3.3  
UniRef50_Q2QR52 Cluster: Transposon protein, putative, CACTA, En...    34   4.4  
UniRef50_Q17G68 Cluster: Formin 1,2/cappuccino; n=2; Culicidae|R...    34   4.4  
UniRef50_Q0U6P9 Cluster: Predicted protein; n=1; Phaeosphaeria n...    34   4.4  
UniRef50_Q9FPQ6 Cluster: Vegetative cell wall protein gp1 precur...    33   7.6  

>UniRef50_Q9LVN1 Cluster: Gb|AAD23008.1; n=2; Arabidopsis
           thaliana|Rep: Gb|AAD23008.1 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 1307

 Score = 35.9 bits (79), Expect = 1.4
 Identities = 20/67 (29%), Positives = 22/67 (32%)
 Frame = -1

Query: 654 PXFXPXFXGNPFXPPXXXKXPFPHPXPXVXXFFXEKTXXAPKKXNPFPPGXAVFXXQKXP 475
           P   P    N    P   + P P P P +      K    P    P PP   V      P
Sbjct: 670 PARSPPPISNSDKKPALPRPPPPPPPPPMQHSTVTKVPPPPPPAPPAPPTPIVHTSSPPP 729

Query: 474 PXPPPXP 454
           P PPP P
Sbjct: 730 PPPPPPP 736


>UniRef50_Q6YU87 Cluster: Proline-rich protein-like; n=3; Oryza
           sativa|Rep: Proline-rich protein-like - Oryza sativa
           subsp. japonica (Rice)
          Length = 263

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 16/58 (27%), Positives = 20/58 (34%)
 Frame = -1

Query: 627 NPFXPPXXXKXPFPHPXPXVXXFFXEKTXXAPKKXNPFPPGXAVFXXQKXPPXPPPXP 454
           +P   P     P   P P +   +  +    P    P PP   V      PP PPP P
Sbjct: 77  SPIPTPIIAPPPVSSPAPPLPPLWRRRPRRLPPIWRPTPPSLPVDTMPPPPPPPPPQP 134


>UniRef50_Q0CQD0 Cluster: Predicted protein; n=1; Aspergillus
           terreus NIH2624|Rep: Predicted protein - Aspergillus
           terreus (strain NIH 2624)
          Length = 313

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 23/74 (31%), Positives = 23/74 (31%)
 Frame = -1

Query: 675 HXXXXFFPXFXPXFXGNPFXPPXXXKXPFPHPXPXVXXFFXEKTXXAPKKXNPFPPGXAV 496
           H    F P   P   G P  PP     P P P P             P    P PP  A 
Sbjct: 120 HHRGRFMPP-PPVLPGPPVGPPPPPPPPPPPPPPPPPPPPMAGPPPPPGPPPPHPPPPAG 178

Query: 495 FXXQKXPPXPPPXP 454
                 PP PPP P
Sbjct: 179 PPPVAGPPVPPPHP 192


>UniRef50_Q2QR52 Cluster: Transposon protein, putative, CACTA,
           En/Spm sub-class, expressed; n=3; Oryza sativa|Rep:
           Transposon protein, putative, CACTA, En/Spm sub-class,
           expressed - Oryza sativa subsp. japonica (Rice)
          Length = 378

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
 Frame = -1

Query: 624 PFXPPXXXKXPF---PHPXPXVXXFFXEKTXXAPKKXNPFPPGXAVFXXQKXPPXPPP 460
           PF P      PF   P P P    F       AP    PFP    +F     PP PPP
Sbjct: 244 PFLPFPLPPIPFLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPP 301


>UniRef50_Q17G68 Cluster: Formin 1,2/cappuccino; n=2; Culicidae|Rep:
           Formin 1,2/cappuccino - Aedes aegypti (Yellowfever
           mosquito)
          Length = 891

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 22/57 (38%), Positives = 22/57 (38%)
 Frame = -1

Query: 624 PFXPPXXXKXPFPHPXPXVXXFFXEKTXXAPKKXNPFPPGXAVFXXQKXPPXPPPXP 454
           P  PP     P PHP P    F   KT  AP    P PP          PP PPP P
Sbjct: 297 PPPPPLPPPLPPPHPPPPPPMF---KTAVAPPGPPPLPP--------PPPPPPPPPP 342


>UniRef50_Q0U6P9 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 349

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 20/56 (35%), Positives = 21/56 (37%)
 Frame = -1

Query: 621 FXPPXXXKXPFPHPXPXVXXFFXEKTXXAPKKXNPFPPGXAVFXXQKXPPXPPPXP 454
           F PP     P P P P V  F   +T  A     P PP          PP PPP P
Sbjct: 27  FSPPPPPPPP-PPPAPRVAGFSYPQTFMASPPPPPPPPPPPPPPPPPPPPPPPPPP 81


>UniRef50_Q9FPQ6 Cluster: Vegetative cell wall protein gp1
           precursor; n=14; root|Rep: Vegetative cell wall protein
           gp1 precursor - Chlamydomonas reinhardtii
          Length = 555

 Score = 33.5 bits (73), Expect = 7.6
 Identities = 21/67 (31%), Positives = 23/67 (34%)
 Frame = -1

Query: 654 PXFXPXFXGNPFXPPXXXKXPFPHPXPXVXXFFXEKTXXAPKKXNPFPPGXAVFXXQKXP 475
           P   P F  N   PP     P P P P         T  +P   +P PP  A       P
Sbjct: 274 PPPRPPFPANTPMPPSPPSPP-PSPAPPTPP-----TPPSPSPPSPVPPSPAPVPPSPAP 327

Query: 474 PXPPPXP 454
           P P P P
Sbjct: 328 PSPAPSP 334


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,421,212
Number of Sequences: 1657284
Number of extensions: 4207113
Number of successful extensions: 12155
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10566
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)